Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0437 ATGGAGAACCAGGAACTTAAAGGTGACCATATGACTACAGGAGCTAGTTTCTCTCAGTTACTCTTTGGAGATGATGATGATGAAGATGCGGGTCTTGATGTGGAACAGACACTTGACTGTTCAACTGTTTTTTCAACTCAGAACATACCCAGAATGCTCTGTTTTGGGAACTATCAAAACGCTGGGGAGCTTTTGCTTTCTGAAGTCATCACTTCTAGTGATTTTTCCTCTGCTTCTTCCTGCAACCGCAGCAATAGCAGCTTCAGATCCTTCTCTAAGTCTAAAGTCTCTATCATGAAAAAGCGAAATGAGTCTGGACAAGAATGCACAGAATCAGTCCCCACAGTAGAAATTGGAAGCCATAGACCACATAAAAAGACCAAAGCAGGGAACCCCATTTCAAATGGCCACATAAAGAGGAAGGAGAAGCTTGGGGAACGAATTGCAGCATTACAACAGCTTGTTTCTCCCTTTGGAAAGACAGATACAGCTTCAGTTCTTCACGAGGCCATGGGCTATATAAGATTTCTTCATGACCAAGTTCAGGTCCTGTGCTCCCCTTACCTGAAACGCTTGTCTTCCTCACCACACCATCACGATCACCATCATCACCACCCACCTGGGGAAGTAGATGAAAAGGGAGAAGCAAAGAAAGAGTTGAGGAGCAAAGGACTGTGCCTTATTCCAGTGGAACGCACCACCGCCATTCACGTGGCTAACAGCAATGGGGCTGATTTCTGGTTACCAGCTATGGAGAATAACGTATCGTCAACCACAAAGAAGCAGTAA 789 0.4499 MENQELKGDHMTTGASFSQLLFGDDDDEDAGLDVEQTLDCSTVFSTQNIPRMLCFGNYQNAGELLLSEVITSSDFSSASSCNRSNSSFRSFSKSKVSIMKKRNESGQECTESVPTVEIGSHRPHKKTKAGNPISNGHIKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLKRLSSSPHHHDHHHHHPPGEVDEKGEAKKELRSKGLCLIPVERTTAIHVANSNGADFWLPAMENNVSSTTKKQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0437 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 188 IPR036638 GO:0046983
Glsi01g0437 262 Gene3D - 138 195 IPR036638 GO:0046983
Glsi01g0437 262 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 236 - -
Glsi01g0437 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Glsi01g0437 262 CDD bHLH_AtbHLH_like 139 184 IPR045239 -
Glsi01g0437 262 MobiDBLite consensus disorder prediction 193 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0437 Glsi-ChrGlsi01 3831617 3833941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0437 139 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 53.571 5.44e-33 116