Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0396 ATGCTCAGATTACCAAGAATATCAAAATGGGTGCTTGTGGGATTCCCCAAAATTGAAAGATCATGGTCATCAAAACCCAATTGCCCACACGATTGCTTTTGGAGCCTACTCTACTCTCTCTTCCGCTCTGCACCCCCCTTCCCTCCCAAATCACACACTGAGAGAGACAAAAAGAGTGATGGGTTTGAGACTTCCCTGAAGATGGCATTCCACCATCACAATGAACCCCTAGAACACCATGACGATGCTTCTCTTTTCCTGGATCCTCTGTACTGTGATGAGGGAAAATGGGAAGAAGATGAAGATGAAACTGATGTGGGTAACAATGATGGAAATGACCCTCCTCTGTTTTCTCTGCCCTTGTTGGAGCAAGATTTGTTCTGGGAAGATGAAGAGCTAAACTCTCTCTTCTCTAAAGAACAGAAACAGCAAGAAGAAGCATGTTTCAATCTGGGTAATGTGGATTTAGTCTTGGACCCGTCACTCTCAGTGGCCCGTCGTGAGGCAGTAGAATGGATGCTTAAAGTCAATGCCCATTATGGGTTCTCCGCTCTCACTTCGACTCTGGCCATAAATTACTTTGATAGATTCCTTCTGAGCTTCCATTTTCAAAGAGAGAAGCCATGGATGATCCAGCTTGTGGCTGTCACTTGCCTTTCTTTAGCAGCAAAAGTCGAAGAGACTCAAGTTCTTCTTCTTTTAGACCTCCAAGTGGAGGAGACGAAGTATGTGTTCGAAGCCAAGAATATTCAGAGAATGGAGCTTCTGGTTCTTTCTACCCTGAAATGGAAGATGCACCCAGTGACCCCACTTTCATTCTTGGATCACATCATAAGGAGGCTTGGATTGAAAACCCATCTTCACTGGCAATTTCTCAAGAGCTGTGAGCGTCTTCTTCTATCTGTACTTCCAGATTCGAGATTCGTTGGTTGTCTTCCTTCTGTGTTGGCCACTGCGACAATGCTGCATGTCATAGACCAGATCGAGCACAATGATGGGGGAGAATATAAAAATCAGCTTCTGGGTGTTCTTAAAATCAGCAAGGAGAAAGTTTATGACTGTTATAATGCAATCCTTCAGCTCTCGAATGCCAATAATTATGCCCAAAACAACAATCCTCGGAAGCGCAAGTATGACCAAATCCCAGGTAGCCCAAGTGGCGTAATCGATGCTGCTTTTGGGACTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTCATCACCAGAGCCTCTGTTCAAGAAGAACAGAGCCCAAGAACAACAAATGAAATTGTCACCACTCAACCGGGTCGTTGTCGCCATTGTTGGCACCTCTCCTTAA 1332 0.4497 MLRLPRISKWVLVGFPKIERSWSSKPNCPHDCFWSLLYSLFRSAPPFPPKSHTERDKKSDGFETSLKMAFHHHNEPLEHHDDASLFLDPLYCDEGKWEEDEDETDVGNNDGNDPPLFSLPLLEQDLFWEDEELNSLFSKEQKQQEEACFNLGNVDLVLDPSLSVARREAVEWMLKVNAHYGFSALTSTLAINYFDRFLLSFHFQREKPWMIQLVAVTCLSLAAKVEETQVLLLLDLQVEETKYVFEAKNIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKSCERLLLSVLPDSRFVGCLPSVLATATMLHVIDQIEHNDGGEYKNQLLGVLKISKEKVYDCYNAILQLSNANNYAQNNNPRKRKYDQIPGSPSGVIDAAFGTDGSNDSWAVGSSLYSSPEPLFKKNRAQEQQMKLSPLNRVVVAIVGTSP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0396 443 CDD CYCLIN_AtCycD-like_rpt2 268 358 - -
Glsi01g0396 443 CDD CYCLIN_AtCycD-like_rpt1 165 263 - -
Glsi01g0396 443 PANTHER CYCLINS 131 362 IPR039361 -
Glsi01g0396 443 SMART Cyclin_C_2 268 387 IPR004367 -
Glsi01g0396 443 SUPERFAMILY Cyclin-like 128 266 IPR036915 -
Glsi01g0396 443 SMART cyclin_7 171 259 IPR013763 -
Glsi01g0396 443 FunFam CYCLIN D32 267 356 - -
Glsi01g0396 443 SUPERFAMILY Cyclin-like 269 367 IPR036915 -
Glsi01g0396 443 Gene3D - 163 266 - -
Glsi01g0396 443 Pfam Cyclin, C-terminal domain 268 379 IPR004367 -
Glsi01g0396 443 FunFam D3-type cyclin 159 266 - -
Glsi01g0396 443 Pfam Cyclin, N-terminal domain 164 265 IPR006671 -
Glsi01g0396 443 Gene3D - 267 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0396 Glsi-ChrGlsi01 3342517 3346866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0396 68 377 Core Cell Cycle Gene Families AT4G34160 56.090 1.89e-111 331