Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0391 ATGGGCGCAATTACCATCTCTCTGCGTGTTTCATTATTGGTATGTGTTTTCTTGTTTCAATCATATTTGCTCAATGGGGTGTCGGTGGCTGCTTCTGAAGAGCTTGCTCGCTCAGAAAGGGAGGCATTGGAAATCATCATCGGAGGTGGTGGGGGCGGCGGCTATGCCCCTGCTCCCTCTGATTGTCCCCCTCCACCACCACCGCCGCCCTGTCCGCCGCCACCGCCCCCCACCATAACCCGGCTGGAGAAAGCACGGCGGGTCCTTTTAAAATTTGCTAGCGGAATTGATGATCCCAAGGGGTTTACAAAAAACTGGAAGGGTTCTTACCCTTGTATTTACAAAGGGGTGAAATGTGACACTTATCCAAACTCAACGGAGAAAGCAGTTTCAGGATTAGACTTTAACCAAGCTGGCTTCTCCGGGCATCAATGTTCCAATTTGAGCACGTCAGTGATCTTGGGTATACCAGAATTGACATTCTTCCACGTCAACTCCAACAACTTCACAGGAGCCATATCAGAACAAATCACCAAGTCCCCTTTTTTCTTCGAGCTTGACCTCAGTAACAACAAGCTGATCGGTAAATTTCCCAGGGAAGTTCTTGGTGCCAAGCAACTAGTTTTCTTAGACCTCAGGTTCAACAGCTTCTCTGGGCCAGTTCCTCCAGAATTGTTTGAGATGGATCTAGACGTGATTTTCATCAACAACAATAAATTCTGTCAAGATCTTCCTGGGAATTTTGGGTCCACATGTGCCAGGTATCTCACATTTGCCAACAACGAATTCACAGGTCCAATCCCCAGTAGCATAGGAAAAGCTTCAAATACCCTCACTGAAGTGCTCTTCTTGGGGAACCATTTTTCTGGGTGCTTGCCATACGAGATTGGGTACCTAAAGAAGGCCACAGTTTTTGACGTGAGCAAAAACTGGTTGACGGGTCCAATCCCACATTCCTTTGCCTGCTTAGAAAAGATTCAGTTCTTGAATTTGGCTCAGAACATGTTCTATGGTCCTGTTCCTGAGATGGTGTGCCAGCTTCCAGGACTGTGCAACAATGGCAACCTGACCTTATCAGGGAACTATTTCACACAGGTTGGACCTGAATGCAGGAAGCTCATAAAAGCCAATGTGCTTGATGTGAGCCAGAATTGCATTCTGGGGCTTCCAAATCAAAGATCACAAGCAGATTGCTCTGCATTTTTCTCTTCCGTCAAGCCCTGTCCAAATTCCAAGTCTTTGACTTACATCCCATGTAAGAAATACTATTCAAACTCGGAGACCACGAAGGTTAGTTCTGAAACAACATCTTCTTCACCTCCTTCGCCTGTGACTTACAATTCTCTGAATCCGAGTCCGCATCGGTTGTGA 1371 0.4668 MGAITISLRVSLLVCVFLFQSYLLNGVSVAASEELARSEREALEIIIGGGGGGGYAPAPSDCPPPPPPPPCPPPPPPTITRLEKARRVLLKFASGIDDPKGFTKNWKGSYPCIYKGVKCDTYPNSTEKAVSGLDFNQAGFSGHQCSNLSTSVILGIPELTFFHVNSNNFTGAISEQITKSPFFFELDLSNNKLIGKFPREVLGAKQLVFLDLRFNSFSGPVPPELFEMDLDVIFINNNKFCQDLPGNFGSTCARYLTFANNEFTGPIPSSIGKASNTLTEVLFLGNHFSGCLPYEIGYLKKATVFDVSKNWLTGPIPHSFACLEKIQFLNLAQNMFYGPVPEMVCQLPGLCNNGNLTLSGNYFTQVGPECRKLIKANVLDVSQNCILGLPNQRSQADCSAFFSSVKPCPNSKSLTYIPCKKYYSNSETTKVSSETTSSSPPSPVTYNSLNPSPHRL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0391 456 Gene3D Ribonuclease Inhibitor 253 443 IPR032675 -
Glsi01g0391 456 Gene3D Ribonuclease Inhibitor 82 252 IPR032675 -
Glsi01g0391 456 MobiDBLite consensus disorder prediction 431 456 - -
Glsi01g0391 456 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 242 340 - -
Glsi01g0391 456 MobiDBLite consensus disorder prediction 56 77 - -
Glsi01g0391 456 SUPERFAMILY L domain-like 84 389 - -
Glsi01g0391 456 Pfam Leucine rich repeat N-terminal domain 85 120 IPR013210 -
Glsi01g0391 456 MobiDBLite consensus disorder prediction 58 77 - -
Glsi01g0391 456 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 36 444 - -
Glsi01g0391 456 SUPERFAMILY Formin homology 2 domain (FH2 domain) 65 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0391 Glsi-ChrGlsi01 3310955 3312325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0391 81 403 Leucine-rich Repeat extension Gene Families AT3G24480 43.385 5.09e-77 247