Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0390 ATGGAAGCCAAGTACTTGGCTTACACAATAATCTTCACCTCCCTTCTATGTATAAACTCTGATCAAATCCTTGAATGTCCATCACCATCACCGTCACCATCATCATTGCCGTTAATCCCAGAAATTTTGAACTTCCTAGACCAGAGAGTCGCTCAAGTCATCCCAATTATTCTAGCCTTCAAGAAAACAATCACCTCAGACCCATTTGGAGTGACCAAAACTTGGGTTGGTCCAAACATATGTAACTACACAGGTTTCTACTGTGGTCACCCACTTGACAACCTCACCGCCACCGCGGTTGCCTCCATAGATTTCAATGGCTTTCAGCTTGCCGCCCCGAGCCTCGACGGATTCATCGATCAACTCCCTGATTTGGCTCTCTTCCATGCAAACACCAACAATTTCTCAGGCACCATTTCACCCAAAATTGCAGAACTCACCTTCCTTTATGAACTTGATGTTAGCAACAATTTACTCTCTGGGGAATTTCCTGTTGCAGTCCTCAACTTGCCCACCTTATCCTTCTTGGATATTAGGTTCAACTTCTTCGTTGGTAGAGTTCCGCCACAAATTTTCTTAGAAACCCTAGATGTACTTTTCCTCAACAACAACAATTTCATGCAGCAGCTTCCTTTTAACTTGGGTGAAACAACGGTGCTTTATCTCACTTTGGCTAACAACAAGTTCACCGGCCCAATCCCCCGGAGCATTGGAAAAGCCTCGACAACATTGTTGGAGGTATTGTTCCTGAACAACCAGTTAACAGGGTGCCTTCCCTACGAAATAGGGTTTCTATCAAAGCTGAGACTATTCGACGCCGGTAACAATCTCCTGACGGGGCTGCTGCCGTGCTCGTTCGGGTGCTTGGAGAAGGTGGAGCAGCTCAACCTAGCCGGAAACTTGCTGTACGGCCCTGTGCCGGAGGTGGTGTGTGCGTTGGAGAATCTGGCAAATTTGTCATTGTCCAATAACTACTTCACGAGAGTAGGGCCATTGTGCAGGAAGCTGATCAAAAGGGGTGTTCTTGACGTGAGGAAGAACTGTATTTTTGGAAATGGGGTTTCCGATCAGAGACCATTTGAAGAGTGTATAGAGTTCTTCTTGCACCCAAGATCTTGTTTCCATCTGGCGTCGTTTAATTTCATACCTTGTAAGGTTCCTCCATGGAGACATCATTGGGTTACAGGTACACCTAAGACTAATAAGAGGCATTTGCTGTCATACTCTGCTCTTTCGACAAATAGAGTATTGTAA 1254 0.4553 MEAKYLAYTIIFTSLLCINSDQILECPSPSPSPSSLPLIPEILNFLDQRVAQVIPIILAFKKTITSDPFGVTKTWVGPNICNYTGFYCGHPLDNLTATAVASIDFNGFQLAAPSLDGFIDQLPDLALFHANTNNFSGTISPKIAELTFLYELDVSNNLLSGEFPVAVLNLPTLSFLDIRFNFFVGRVPPQIFLETLDVLFLNNNNFMQQLPFNLGETTVLYLTLANNKFTGPIPRSIGKASTTLLEVLFLNNQLTGCLPYEIGFLSKLRLFDAGNNLLTGLLPCSFGCLEKVEQLNLAGNLLYGPVPEVVCALENLANLSLSNNYFTRVGPLCRKLIKRGVLDVRKNCIFGNGVSDQRPFEECIEFFLHPRSCFHLASFNFIPCKVPPWRHHWVTGTPKTNKRHLLSYSALSTNRVL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0390 417 Gene3D Ribonuclease Inhibitor 216 353 IPR032675 -
Glsi01g0390 417 SUPERFAMILY L domain-like 60 350 - -
Glsi01g0390 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 18 387 - -
Glsi01g0390 417 Gene3D Ribonuclease Inhibitor 55 215 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0390 Glsi-ChrGlsi01 3292765 3294175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0390 37 373 Leucine-rich Repeat extension Gene Families AT3G22800 44.675 3.68e-81 255