Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0380 ATGTCGGACTTCAAATTTAGAAGTAGGCTCTTGGGCCTTTGGGGGAGTGTGCGCTTTGTCTTCAGTCTTGCCTCCGCTCATTCAGAGGCTAGCGAATTAGGGTTTTCTAGACTTGAAGGGGACACAGCAATGGAGCAAGCACCGGCGCAAGCGATCGAACAGGTTCAGTGCTTCGGCCGCAAGAAAACTGCTGTGGCCGTGACCTACTGCAAACGCGGCCGCGGACTCATCAAGATCAATGGCTGCCCAATCGAACTCGTGGAGCCGGAGATCCTCCGATTCAAGGCATTCGAGCCCATCCTTCTCTTGGGAAAGCACCGTTTCGCCGGCGTCGACATGCGCATCCGGGTCAAGGGTGGTGGGCACACCTCGCAGATATATGCAATTCGTCAGAGCATAGCCAAAGCCCTCGTTGCTTTTTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAGATCAAGGACATCCTGGTTAGGTACGACCGAACCCTGCTTGTAGCTGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTAGGTTCCAGAAGTCCTACCGTTGA 576 0.5521 MSDFKFRSRLLGLWGSVRFVFSLASAHSEASELGFSRLEGDTAMEQAPAQAIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0380 191 Gene3D - 45 191 IPR014721 -
Glsi01g0380 191 FunFam 40S ribosomal protein S16 47 191 - -
Glsi01g0380 191 Pfam Ribosomal protein S9/S16 59 191 IPR000754 GO:0003735|GO:0005840|GO:0006412
Glsi01g0380 191 ProSitePatterns Ribosomal protein S9 signature. 119 137 IPR020574 GO:0003735|GO:0005840|GO:0006412
Glsi01g0380 191 PANTHER RIBOSOMAL PROTEIN S9 44 188 IPR000754 GO:0003735|GO:0005840|GO:0006412
Glsi01g0380 191 SUPERFAMILY Ribosomal protein S5 domain 2-like 54 191 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0380 Glsi-ChrGlsi01 3139216 3140567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0380 47 191 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.276 8.15e-94 268