Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0378 ATGGCTACCAACGGAGATCACAAGCAAACTGAAGCTGGAAGGCATCAAGAGGTTGGCCACAAGAGCCTACTTCAGAGTGATGCTCTCTACCAGTATATTCTGGAGACAAGTGTTTACCCAAAAGAACATGAAGCTATGAAGGAGCTGAGGGAGTTAACAGCAAAGCACCCATGGAACATCATGACAACCTCAGCAGACGAAGGGCAATTCTTGAACATGCTTCTTAAGCTTATCAATGCTAAGAACACCATGGAAATTGGTGTCTACACTGGCTACTCCCTTCTCGCCACTGCTCTGGCTCTTCCTGAAGATGGAAAGATATTGGCGATGGACATAAACAGGGAGAACTACGATTTGGGTCGACCGGTAATTGAGAAAGCCGGGGTTGCCCACAAAATTGATTTCAGAGAAGGCCCTGCTCTCCCTGTTCTTGACGAACTCGTTCAAGACGAAAAGAAGCGTGGGAGCTTCGATTTCATATTTGTGGATGCAGACAAAGACAATTACCTAAACTACCACAAGAGGCTAATTGAGCTAGTGAAGGTGGGGGGCTTGATCGGCTACGACAACACATTGTGGAACGGCTCTGTGGTGGCACCAGATGATGCGCCGCTTAGGAAGTACGTGATGTATTATAGGGACTTCGTGTTGAAGCTGAACAAGGCTTTGCCTGCGGACCCCAGGATTGAAATCTGCATGCTTCCTGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAAGTGA 744 0.4785 MATNGDHKQTEAGRHQEVGHKSLLQSDALYQYILETSVYPKEHEAMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYDLGRPVIEKAGVAHKIDFREGPALPVLDELVQDEKKRGSFDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPDDAPLRKYVMYYRDFVLKLNKALPADPRIEICMLPVGDGITLCRRIK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0378 247 FunFam Caffeoyl-CoA O-methyltransferase 1 15 247 - -
Glsi01g0378 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
Glsi01g0378 247 Pfam O-methyltransferase 35 246 IPR002935 GO:0008171
Glsi01g0378 247 PANTHER O-METHYLTRANSFERASE-RELATED 20 246 - -
Glsi01g0378 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
Glsi01g0378 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0378 Glsi-ChrGlsi01 3132408 3133899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0378 4 246 Monolignol Biosynthesis Gene Families AT4G34050 86.475 2.91e-161 446