Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0368 ATGGCTACCCCAGAGAAATCTACGTCAATAGTGTCTTCAGACTCCTTGGAACAGAAGGGAAAAGATATGAGTAATATGGCTGAATCAAATGAGAACTTGCTTCAATATCCTTCAAACCAGCAACTTTGTAACTCTTTGAATGGCCCAGTGGCTATCCTTTGGGATATTGACAATTGTCGTGTCCCAAGTGGTGTTTGCCCTGAAGATGTAGCTGGCAATGTAATAATGGCTTTGCAGGTGAATCCAACAACTAGAGGACCTGTGAAGATGTTTTCTGCTTATGCGGACTTCAACTTCAAAGACTATACCAATAAACTCAGAGTGGCCTTCCATAGAACTGGTGTTAAACTCGTTGATGTTCCCAGGGGGAGAAAGGATGCGGCTGACAGAGCTATCTTGCTTGACATGCTCATGTTTACCAGTGACAACCCTATTCCTTCCTCTATCATGTTGATATCTGGAGATGTTGATTTCGCTCCAGCACTGCACACTCTTGGTCGACTGGGACATACTGTCATTCTTGTCATTCCTCCCAGGAGGGGTGTTTCACGTGCTCTTAGGAATGCAGGTAAATTTGTCTGGGACTGGCATAAGATTGCTCGTGGAGAAGGCCCTGTGGCTCTAAGGTACCATATCAAGGACAATCTCAGTAGTGAGCTGGTAGAGTTGCTTGAACTTTCTGGCGGAAGCCTGCTTCAGATCCAAGTTGGAGGAGAGTATCAGAAACATTTTGGGAAGCCTCTCAGGGCAGGCGGCAAACTAGCAAAGATTTTCGGGAAGAGGGACGACATCTTCGCTGTAAAAGGGATACGGCGTGAAAAAGTTGTATCTCTCCTAAACTATAAATCTGGCCCAAGTGCAACCCCTTTGAACCAGGCAAAAGATGATAAGAAAGGAAAAGGGGTTGAGGAAGAGAATGTCGATGAAAGTGCAACCCCTTTGAACCAGGCAAAAGATGATAAGAAAGGAAAAGGGGTTGAGGAAGAGAATGTCGATGTCACTTCTGGTTGCCCTTCGGGAGATACTTAA 1029 0.4529 MATPEKSTSIVSSDSLEQKGKDMSNMAESNENLLQYPSNQQLCNSLNGPVAILWDIDNCRVPSGVCPEDVAGNVIMALQVNPTTRGPVKMFSAYADFNFKDYTNKLRVAFHRTGVKLVDVPRGRKDAADRAILLDMLMFTSDNPIPSSIMLISGDVDFAPALHTLGRLGHTVILVIPPRRGVSRALRNAGKFVWDWHKIARGEGPVALRYHIKDNLSSELVELLELSGGSLLQIQVGGEYQKHFGKPLRAGGKLAKIFGKRDDIFAVKGIRREKVVSLLNYKSGPSATPLNQAKDDKKGKGVEEENVDESATPLNQAKDDKKGKGVEEENVDVTSGCPSGDT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0368 342 PANTHER LIMKAIN B LKAP 26 293 IPR024768 GO:0005777|GO:0010468
Glsi01g0368 342 CDD PIN_limkain_b1_N_like 49 177 - -
Glsi01g0368 342 Gene3D - 45 198 - -
Glsi01g0368 342 MobiDBLite consensus disorder prediction 286 342 - -
Glsi01g0368 342 Pfam NYN domain 49 191 IPR021139 GO:0004540
Glsi01g0368 342 MobiDBLite consensus disorder prediction 314 329 - -
Glsi01g0368 342 MobiDBLite consensus disorder prediction 293 307 - -
Glsi01g0368 342 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0368 Glsi-ChrGlsi01 3036875 3037903 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0368 46 207 C2H2 Transcription Factor Family AT5G61190 39.506 4.54e-27 110