Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0362 ATGTGTATGGAGATTGCTGCTATTCTAGTATGCATATTCATCTTCCTCTCAATTCTTCTTTCATTTTCCTTAATAAATAAGGACAGGAATAAACCCCAAGGCATAGCTAAACTTCCACCAGGATCAATGGGTTGGCCTTACATAGGAGAGACTCTTCAGCTCTACTCTGAAGATCCCAATGTCTTCTTTGCTTCAAAGCAGAAAAGATATGGAGAAATCTTCAAAACCCACGTGCTAGGTTGTCCCTGTGTGATGCTGGCTAGCCCAGAGGCTGCTCGCTTTGTGCTGGTGACCCATGCTCACTTGTTCAAGCCCACATACCCCAAAAGCAAAGAGAAGCTAATTGGCCCTTCCGCATTGTTCTATCACCAAGGAGACTACCATACTAGCCTAAGGAAGCTCGTCCAAGCTTCTCTTTCTCCTGAAACAATCCGAAAACTCATCCCCGACATAGAATCCACAGCCACTTCTGCTTTGGAAAACTGGGTTTCTTCTGGACAGGCCATCAACGTTTTTCATGAAATGAAAAAGTTCTCTTTCTATATCGGTATCCTCTCCGTGTTTGGTCACTTGGAAGGCAATTATAGAGAGCAGCTTAAGGAGAACTACTGCATAATAGAGAAAGGTTACAATTCTTTCCCAACTAAGATACCGGGAACTGCATACTCCAAAGCTCTCCTGGCAAGAAGGAGAATCATGGAGATTATTAGTGAGATAATAAGCAAGAGAAAAGAGCAAAGATTGATGGAGAAGGACCTGTTGGGCCACCTGTTGAACTACAAAGATGAAAAGAGCCAAACACTGAGTGATGATCAAATTGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGACACAACAGCTAGTGTTCTAACATGGATTCTCAAGTATCTTCATGACGACCAGAAGCTTCTTGAAGCCGTAAAAATAGAGCAAATGGCCATATATGAAGCCAATGAAAGAGGGAAGAAGCCCCTGACATGGAGACAGACTAGAAATATGCCAATCACTTATAGGATGATATTGGAGAGCCTGAGGATGGCAAGCATCATATCTTTTACCTTTAGGGAAGCTGTGATTGATATTGTATACAAGGGATATCTCATACCAAAGGGCTGGAAAGTGATGCCACTGTTTAGGAACATCCATCATAATCCAGAATTCTTCTCAGCTCCTCATAATTTTGACCCCTCAAGGTTTGAGGTTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAATGGAGTACACTCTTGTCCTGGGAATGAGCTGGCCAAGTTGAACATATTGATTTTAATCCACCATTTAGTGACCAAATTTAGGTGGGAAGTGGTGGGAGAAGAGGAGGGAATTGAATATAGCCCATTCCCAGTGCCCCTGCATGGTCTCCCTGCAAGATTTTGGAGGCAGCAGTAG 1419 0.4306 MCMEIAAILVCIFIFLSILLSFSLINKDRNKPQGIAKLPPGSMGWPYIGETLQLYSEDPNVFFASKQKRYGEIFKTHVLGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGPSALFYHQGDYHTSLRKLVQASLSPETIRKLIPDIESTATSALENWVSSGQAINVFHEMKKFSFYIGILSVFGHLEGNYREQLKENYCIIEKGYNSFPTKIPGTAYSKALLARRRIMEIISEIISKRKEQRLMEKDLLGHLLNYKDEKSQTLSDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAVKIEQMAIYEANERGKKPLTWRQTRNMPITYRMILESLRMASIISFTFREAVIDIVYKGYLIPKGWKVMPLFRNIHHNPEFFSAPHNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNILILIHHLVTKFRWEVVGEEEGIEYSPFPVPLHGLPARFWRQQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0362 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Glsi01g0362 472 SUPERFAMILY Cytochrome P450 37 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 Gene3D Cytochrome P450 28 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PANTHER CYTOCHROME P450 26 37 458 - -
Glsi01g0362 472 FunFam Abscisic acid 8 28 470 - -
Glsi01g0362 472 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0362 472 CDD CYP90-like 67 467 - -
Glsi01g0362 472 Pfam Cytochrome P450 39 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0362 Glsi-ChrGlsi01 2951668 2956159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0362 9 471 Cytochrome P450 AT3G19270 71.058 0.0 706