Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0331 ATGGCTTCTTCTTCTTCTCCTTCCTCGGAAGCTTCCAATCTTCCTCTTAAAGCTATCCCCGGAAGCTATGGCCTTCCTTACTTTGGAGCCGTGAGTGATAGACACGACTTTTTCTACACCCAAGGCCGTGATAAGTTCTTCTCCTCCAGAATCCAAAAGTACGATTCTACTGTCTTCAGGTGCAATATGCCTCCCGGTCCCTTCATCTCTTCGGATTCACGAGTCATCGCTGTTCTTGACGCCATTAGCTTCGCTATCCTCTTAGACAACTCCAAGGTCGAGAAGCGTGACGTCCTCGACGGCACTTTCATGCCCTCCACCGCCTTCACCGGCGGTTTCCGCGTCTGCGCCTTTCTGGACACCTCCGAACCCAACCACAACCTCATCAAGAGCTTCTTCCTCCACCTCCTCTCCTCCAAACACGACACCTTCCTCCCGCTGTTCCGGAATTCCTTGTCGGAACTCTTCTCCGAGCTCGACGATAAATTATCCAGCAAAGGCAAAGCTGATTTCAACGCCGTCAACGACCAAATGTCCTTCAATTTCGTGTTCCGCCTCCTCTGCGGCGGTACAAACCCATCTGAGACGAATCTCGGGTCAGATGGTCCGAAATTAATGTTAAAGTGGCTGGGAGTTCAGCTCGCTCCGCTTGGAACACTTGGTTTGCCTCAGATATTTGGCTACGTGGAAGATTTCATGATCCGAACGGTGCCGCTTCCGGAGTGGATCGTTAAATCGGATTACAAGAAGCTTTACGAAGCTTTCTCGGCTTCGGCGTCGGTGGCGTTGGATGAAGCGGAGCGTTCTGGGATCAAAAGAGACGAAGCTTGCCATAATTTGATTTTCATGGCGGGTTTCAACGCTTACGGTGGGTTGAAGAGCCAGTTTCCTATACTGATGAAGTGGGTGGGATCGGCTGGGGAGGGTCTACACAAGGAGCTCGCTGATGAGATCAGGGCCGTCGTTAAGGCAGAAGGCGGAGTCACTTTTGGTGCGTTGGATAAGATGACTTTGACCAAATCTGTGGTGTACGAGGTTTTGAGGATTGAGCCTACTGTACCGTACCAGTACGCGAAGGCGAGGGAGAATCTCGTGGTCCACTCTCACGATGCGGCGTTTGAGATTAAGAAAGGAGAGATGATCTTCGGATATCAGCCGTTCGCTACGAAGGATCCAAAGGTATTCGAGAATCCGGAGGAGTTCGTGGGCCATAGGTTTGTTGGGGATGGCGAAGAGCTGCTGAAGTACGTTTATTGGTCCAACGGACGCGAGACTGAGGATTCCACACCTGATAATAAGCAGTGTCCGGCTAAGAATCTGGTGGTGCTAGTGTGTAGGCTAATGTTGGTGGAGCTCTTCTTACGTTACGACACGTTTACTGTTGACGTCGGAAAAAGCAGTGCAAATTTAGGAGCGTCCGTGACGATAACGTCGTTGAAAAAGGCATCCGCGTAA 1455 0.5093 MASSSSPSSEASNLPLKAIPGSYGLPYFGAVSDRHDFFYTQGRDKFFSSRIQKYDSTVFRCNMPPGPFISSDSRVIAVLDAISFAILLDNSKVEKRDVLDGTFMPSTAFTGGFRVCAFLDTSEPNHNLIKSFFLHLLSSKHDTFLPLFRNSLSELFSELDDKLSSKGKADFNAVNDQMSFNFVFRLLCGGTNPSETNLGSDGPKLMLKWLGVQLAPLGTLGLPQIFGYVEDFMIRTVPLPEWIVKSDYKKLYEAFSASASVALDEAERSGIKRDEACHNLIFMAGFNAYGGLKSQFPILMKWVGSAGEGLHKELADEIRAVVKAEGGVTFGALDKMTLTKSVVYEVLRIEPTVPYQYAKARENLVVHSHDAAFEIKKGEMIFGYQPFATKDPKVFENPEEFVGHRFVGDGEELLKYVYWSNGRETEDSTPDNKQCPAKNLVVLVCRLMLVELFLRYDTFTVDVGKSSANLGASVTITSLKKASA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0331 484 FunFam Allene oxide synthase, chloroplastic 14 484 - -
Glsi01g0331 484 Pfam Cytochrome P450 312 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0331 484 SUPERFAMILY Cytochrome P450 14 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0331 484 CDD CYP74 49 475 - -
Glsi01g0331 484 PANTHER CYTOCHROME P450 26 14 456 - -
Glsi01g0331 484 Gene3D Cytochrome P450 10 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0331 Glsi-ChrGlsi01 2761323 2762777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0331 11 483 Cytochrome P450 AT5G42650 51.789 2.98e-173 495