Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0329 ATGTCTTCCAACTCTGACGCTACCAATACCAATCTCCCACTCAAACCAATCCCTGGTAGCTATGGCTTCCCCTTCTTCGGTGCCATTTCTGACAGATTCGACTTCTTCTACCACCAAGGCCGTGACGAGTTCTTCAGATCACGAGTTAAAAAATACAGCTCCACCGTTTTCAGAACCAACATGCCCCCGGGTCCCTTCATCGCTTCTAACCCCGGAGTCGTCGCCGTCCTTGACGCCGTTAGCTTCCCCATCCTCTTCGACAACTCCAAGGTCGAGAAACGCGACGTTTTCACCGGAACTTTCAGGCCCTCCTTAGACTTCACCAGCGGCTACCGTGTCTGCAACTACCTCGACCCCACCGAACCCAAGCACCATCAAATCAAGAGTTTCTACCTCTCTCTCCTGTCGTCCCGAAAAGACCAGATCCTCCCACTTCTCAGGAGCTACTTGACGGAGTTGTTTCTTAAGCTTGAAGACAAAGTGTCCGACGAGGGCCATGCATACTTCAACCCCATATGCCAAAACGAGCTCTTCAACTTCCTCTTCCGCCTCTACTGCGGCAAAGACCCGACCCAAACGGAACTCGGTTCCAGCGGCCCGAAGAAGCTTGGGCTATGGGTATACCCGCAGGTTTTACCCCTTGGATCGCTGCAGCTACCATGGTACTTCTTCCCCATCAATGTGATCGAAGATCTCTTCCTCCACACATTTCCGTTTCCAGGGTGGTTGCTGAAATGCCACCAAAGGAAGCTTTACAATGTCATTGATACTACAGCCACAGAGGCATTGGGTTTAGCTTCGACTTTTGGATTGTCCAGAGAAGAAGCCTGCATGAACTTGCTCTTTGTTCTGGGTATCAACACTTGCAATGGGACGAAGGTCATCTTCCCAACACTGATAAAGTGGGTGGGTTTAGCTGGGCAGAGTTTACACCACAGTCTCGCCGAAGAGATCAGAACCGTTGTGAAAGCTGAAGGTGGGGTCACATTTGGGGCGTTGGAGAAGATGCCATTGGTGAAGTCGGTGGTGTGGGAGGTTCTGAGGATTGAGCCTCCGGTACCGTACCAGTACGCAAAGGCAAAGGAAGATCTGGTGATTCAGAGCCATGAAGCTTCATTTTTGGTGAAGAAGGCGGAGATGATATTTGGGTATCAACCATTAGCTACGAAAGATCCAAGGGTGTTTGAGAAAGCGGAGGAATTTGCGGGAGATAGATTTGTGGGAGAAGAAGGGGAGAAGCTATTGAAGTATGTATATTGGTCGAATGGGCGGGAGACGGAGGAGCCCACGGCGGCGAACAAGCAGTGTCCGGGGAGGGATCTTGTGGTGATAATGCTAAGGGTGCTTTTGGTGGAGTTTTTCTTAAGGTTTAACACTTTCACTGTGAAGCTTGGGAAGCCCTTGGTGGGTCCAGAAGTTACCATCACGTCTTTGGTCAAAGCCCCGACGACCTTCTGA 1458 0.5075 MSSNSDATNTNLPLKPIPGSYGFPFFGAISDRFDFFYHQGRDEFFRSRVKKYSSTVFRTNMPPGPFIASNPGVVAVLDAVSFPILFDNSKVEKRDVFTGTFRPSLDFTSGYRVCNYLDPTEPKHHQIKSFYLSLLSSRKDQILPLLRSYLTELFLKLEDKVSDEGHAYFNPICQNELFNFLFRLYCGKDPTQTELGSSGPKKLGLWVYPQVLPLGSLQLPWYFFPINVIEDLFLHTFPFPGWLLKCHQRKLYNVIDTTATEALGLASTFGLSREEACMNLLFVLGINTCNGTKVIFPTLIKWVGLAGQSLHHSLAEEIRTVVKAEGGVTFGALEKMPLVKSVVWEVLRIEPPVPYQYAKAKEDLVIQSHEASFLVKKAEMIFGYQPLATKDPRVFEKAEEFAGDRFVGEEGEKLLKYVYWSNGRETEEPTAANKQCPGRDLVVIMLRVLLVEFFLRFNTFTVKLGKPLVGPEVTITSLVKAPTTF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0329 485 CDD CYP74 46 476 - -
Glsi01g0329 485 Gene3D Cytochrome P450 12 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0329 485 PANTHER CYTOCHROME P450 26 12 460 - -
Glsi01g0329 485 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0329 485 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0329 485 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0329 485 Pfam Cytochrome P450 312 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0329 485 FunFam Allene oxide synthase, chloroplastic 12 483 - -
Glsi01g0329 485 SUPERFAMILY Cytochrome P450 13 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0329 Glsi-ChrGlsi01 2733515 2735563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0329 9 481 Cytochrome P450 AT5G42650 50.211 5.81e-168 482