Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0328 ATGTCTACCAGAAGGGAAGTAGGAGAAAAAGATCCACCAAAACCACCAGTCAAAGAACCAATAGTTAACCCTTCCAAAAAACTCCCTCTGAAAGCACTCCCTGGAAGCTATGGCCTCCCCTTCATCGGAGCCATTTGGGACAGATTCGACTATTTCTACAACCAAGGTCGGGACGAGTTCTTCAAATCACGAATCAAGAAATACAAATCCACCGTTTTTAGAACTAACATGCCCCCTGGTCCCTTCAACGCTTCCAACCCTAGAGTCGTCGCTGTCCTTGACGCCATTAGCTTCTCCATCCTCTTCGACACCTCCAAGGTCGAGAAACGCGACGTCTTTACTGGAACCTACATGCCCTCCTTACACTTCACTGGTGGACACCGTGTCTGCGCCTACCTCGATCCCTCCGAGGACAAGCACGACAAAGTCAAGAGGTTCCTCTCCTCTCTCCTCTCATCCCGAAAAGACGAGGTCCTCCCACTTCTCACGAGATACTTGAGGGACCTGTTTTTACATCTTGGAGACAAAGTAATTAAACACGATCGCCATGCACACTTCAACTCCATAAGCGACAACGAGCTCTTCAAGTTCGTTTTCCGCCTCTACTGCGGAAAAGAACCGGACCAAACAAAACTCGGATCCTTCACCCAGAAACTCTTTGAGCTTTGGGTTCTCCCGCAGGTTGCACCGCTTGGATCACTTGAGCTACCATGGTTCTTCTTCCCCATTAACGTGGTGGAAGATTTCTTCCTCCATACGCTGCCGTTTCCGGGTTGGCTGCTAAAATGGAACCAAAAGAAGCTTTACAATGTGATTAATACTTCAGCCACGGAAGCACTGGATTTAGCTTCAAAATTTGGGTTATCCAGAGAAGAAGCCTGCAACAACTTGCTCTTCGTTCTGGGTTTCAACACTTACGGTGGGGTAAAAATCGTGTTCCCCACATTGATGAAGTATGTGGGGTTAGCTGGGAAGAGTCTACACAAGAGGCTAGCAGAAGAGATCAGGAGAGTTGTGAAAGAAGAACGTGATGAGGTCACATTGGGGGCGTTGGAGAAGATGAAACTGGTGAAGTCGGTGGTGTGGGAGGTTCTTAGGATTGAACCTCCGGTACCGTACCAGTACGGGAAGGCGAAGGAAGATGTGGTGATTAAGAGCCATAATGCCGCGTTTGTAGTGAAGAAGGGGGAGATGATATTTGGGTATCAGCCATTTGCTACGAGGGATCCAAAAGTGTTTGAGAATCCGAGGCAGTTTGTGGGAGATAGATTTGTGGGAGAAGGGGAGAAGCTGTTGAAGTATGTGTATTGGTCGAATGGGCGAGAGACGGAGAATCCAACGGCGGAGAACAAACAGTGTCCGGGGAAGGATCTGGTAGTGCTGATGCTAAGGGTGTTTTTGGTGGAGTTTTTCTTAACGTTTGACACTTTCGCTGTGGAGCTTGGGAAGCCCACGCTGGGTCCCTCAGTTACCATCAAGTCCTTGTTTCTTGCTAAGAAGCTCTCTTTTATCCCAAATTTAAAACTGTCATACAAGGAGGAAGATTCACCAGACAGAGAGGTAACGACAACATTAGTGATGATAGTGGCGGGCTGCGATGGAAGGGTATTCCCTACAACATCGCCGATAGAATCAACAAATGAGGGCTTTAGTGTTTTGGAGAATGTTGAGGGCTTCAGAAGCGAGGGAACTAGATATTAG 1701 0.4791 MSTRREVGEKDPPKPPVKEPIVNPSKKLPLKALPGSYGLPFIGAIWDRFDYFYNQGRDEFFKSRIKKYKSTVFRTNMPPGPFNASNPRVVAVLDAISFSILFDTSKVEKRDVFTGTYMPSLHFTGGHRVCAYLDPSEDKHDKVKRFLSSLLSSRKDEVLPLLTRYLRDLFLHLGDKVIKHDRHAHFNSISDNELFKFVFRLYCGKEPDQTKLGSFTQKLFELWVLPQVAPLGSLELPWFFFPINVVEDFFLHTLPFPGWLLKWNQKKLYNVINTSATEALDLASKFGLSREEACNNLLFVLGFNTYGGVKIVFPTLMKYVGLAGKSLHKRLAEEIRRVVKEERDEVTLGALEKMKLVKSVVWEVLRIEPPVPYQYGKAKEDVVIKSHNAAFVVKKGEMIFGYQPFATRDPKVFENPRQFVGDRFVGEGEKLLKYVYWSNGRETENPTAENKQCPGKDLVVLMLRVFLVEFFLTFDTFAVELGKPTLGPSVTIKSLFLAKKLSFIPNLKLSYKEEDSPDREVTTTLVMIVAGCDGRVFPTTSPIESTNEGFSVLENVEGFRSEGTRY 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0328 566 MobiDBLite consensus disorder prediction 1 21 - -
Glsi01g0328 566 SUPERFAMILY Cytochrome P450 29 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0328 566 CDD CYP74 62 493 - -
Glsi01g0328 566 PANTHER CYTOCHROME P450 26 28 474 - -
Glsi01g0328 566 PRINTS E-class P450 group IV signature 453 471 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0328 566 PRINTS E-class P450 group IV signature 354 370 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0328 566 PRINTS E-class P450 group IV signature 391 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0328 566 PRINTS E-class P450 group IV signature 407 425 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0328 566 MobiDBLite consensus disorder prediction 1 16 - -
Glsi01g0328 566 FunFam Allene oxide synthase, chloroplastic 28 500 - -
Glsi01g0328 566 Gene3D Cytochrome P450 28 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0328 566 Pfam Cytochrome P450 327 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0328 Glsi-ChrGlsi01 2728906 2731370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0328 25 503 Cytochrome P450 AT5G42650 52.917 2.90e-167 483