Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0316 ATGATAGGGTCAGCCCTGCTTCGATCTTGCTATTCTACCCCGCTTCACGAAGCCAAAGATCTTCATCGCGGGGGAAAGTCTTCAACGAAGTATGCTTCCTCTATTAGATGTACATCGGAAAATATTCCCAAGCTAGGACCTTCTAGCCGAACCCCGTTGGAAAAGGCCGTTCAAGAGCCTCGTTCGATCGAAAAAACTGAGAAAGAGCTTGCAGAGTCACCAAAAGAGGACATAGAGAGGTTGATTCTTGAAACAGATGGTGTGAAATCCTTAATAGGAAGCTTGCATGGAATTGCAGGCATGCAGAAACAGAAGAAAATGATGATGAATAAGAAGAAGGAATTAGAGGAAGGGCAAAGACGTTGTCCCATACCAGATGGGTTGCCAAAATCGGAGGAAGAGCTGCTGGAAGAGGAGGAAGCTAGAATGCCTGATTCCCCACACACTAGGCTTCTCAGAAGAATGGGCAGGTTCCCTGCATGCTTTCTTAAGCAGCCTTGGGGCCTTCCAAGGTGGTCAGCCTTAGCCATGGCTATGCCTCATTCAAAGCAGGCCTTGGGCTGCTTCATCCTCTGCTCTCTCTTTGTTTCTTCTCTCCAAACCTTTCTCCCATTACCACCTCTCCTAGAAGATAGTGATCTTGCAGCAGATTTTGAATTGAAAGTAGATGGTAATTTAAATTTTGAAAATGAAAGGCTTAAGAAAGCCTACGTTGCTCTTCAGGCATGGAAAAGTGCTATCTACTCTGATCCATTTGACACTATCAGCAATTGGGTCGGTCGTGATGTTTGTTCCTACAATGGGGTTTTCTGTGCTCCTGCTCTTGATGACCCCAAATTGAACGTTGTTGCTGGTATCGATCTCAACCATGCTGACGTTGCTGGGCATTTAGTGCCAGAATTGGGTCTCTTGACAGATCTTGCACTTTTCCATATTAATTCTAATAGGTTTTGTGGGATTATCCCAAAGAGCTTTGAGAGGCTCACTCTTATGCATGAGTTTGATGTTAGCAACAATCGCTTTGTTGGTGATTTTCCTTCAGCGGTCCTTACATGGCCTAGTGTTAAGTACTTGGATCTCAGATATAATGACTTCGAAGGAGCTTTGCCTCCACAATTGTTTGAGAAGGAACTTGATGCTGTGTTCTTGAACAACAATCGCTTCACCTCGACTATCCCAGAAAATATAGGCCAAACCACAGCCTCGGTAGTGAGCTTTGCTAATAACAATTTCACAGGCTGCATTCCAAAATCAATTGGGAACATGGTGAACTTGAATGAGATTGTGTTCTTGGGCAATGGCCTTGGAGGTTGCCTACCACAGGAGATTGGAAAATTGGCAAATGTGCAAGTTTTTGATGCTAGCCATAATGAGTTTATCGGGACTTTGCCCAACTTGTCAGGTTTGAAGAGTATGGAGGTTATACATATCTCAGACAATGAGCTTTCTGGGTATGTGTCTGACACTATTTGCAAGTTGCCTATGTTGAAAAACTTCACATTCTCTAAAAACTACTTCAATGGGGAAGCTCAAGCTTGTTTGCCTACTTCAAGGGGGAATGTTGTTTTTGATGACACTGACAATTGTTTGCCAGCAAGGCAAAACCAAAAGGCTACTAAGCAATGCATCCCGGTGGTGACTCGCCTTGTGGATTGTAGCAAGAATTGTGGTGGCGGTGGCGACGGTGCTCCTTCAACACCAAAGCCAACCCCAACACCTACACCAGTGCCAAATCCTCCAAAGATTGAATCACCGAAGGTTGAGACACCAAAGGTTAAGTCACCTCCAACACCTTCCCCAACTCCAATTCCATCTTCTCCAAAGGTTGAGACGCCAAAGGCGAAGCCACCTCCAACACCTTCCCCAACCTCAGTTCCATCGCCTCCAAAGACCGAGTCACCTAAGGTTGAGACGCCAAAGGCGAAGCCACCTCCAACACTTTCCCCAACCCCAATTCCATCGCCTCCAAAGACTGAGTTACCTAAGGTTGAGATGCCAAAGGCGAAGCCACCTCCAACACCTTCCCTAACTTCAGTTCCATCGCCTCCAAAGACTGAGACACCTAAAGTTGAGACACCAAAGGTCAAGCCACCTCCAACACCTTCCCCAACCCCAATTCAATCACCTCCAAAGACTGAGTCACCTAAGGTTGAAACACCAAAGGCTAAACCACCTCCAACACCTTCCCCAACCCCAGTTCCATCGCCTCCAAAGACTGAGTCGCCTAAGGTTGAAACACCAAAGGCGAAGCCACCTCCAACACCTTCCCCAACCCCAGTTCCATCACCTCCAAAGATTGAGTCACCTAAGATTGAGACACCAAAGGCCAAGCCACCTCCAACACCTTCCTCAACCCTAGTTCCATCGCCTCCAAAAACTGAGTCACCTAAGATTGAGACACCAAAGGCCAAGCCACCTCCAACACCTTCTCCCACCCCAGTTTCATCGCCTCCAAAGACTGAGTCACCTAAGGTTGAGACACCAAATGCTAAGCCACCTCCAACACCTTCCCCAACCCTAGTTCCATCACCTCCTCTACCAATTCACTCTCCACCACCTCTAGTTCACTCCCCTCCTCCACCGGTTCACTCTCCACCACCACCGATGCACTCTCCTCCGCCCCCAGTGCATTCTCCACCACCCCCAGTGCAGTCTCCTCCTCCTCTAGTCCACTCCCCACCACCCCCAATGCACTCCCCTCCTCCTCCAGTTCACTCTCCTCCTCCTCCAGTGCACTCCCCACCACCCCCAGTGCAATCTCCTCCTCCTCCAATCCACTCCCCACCACCTCCAGTGCAGTCTCCTCCTCCTCCTCCAGTGCACTCCCCACCACCTCCAATGCACTCCCCACCACCCCCAGTGCAATCTCCTCCTCCTCCAGTCCACTCCCCACCACCTCCAGTGCAGTCTCCTCCTCCTCCTCCAGTCCACTCCCCACCACCTCCAGTGCACTCCCCACCACCCCCAGTGTACTCTCCTCCCCCTCCAATCCACTCCCCACCACCCCCAGTGCACTCTCCTCCCCCTCCAGTCCATTCCCCACCACCTCCAGTGCATTCTCCTCCGCCTCCAGTACATTCCCCACCTCCCCCAATTCACTCTCCTCCACCTCCTGTCTATTCTCCCCCTCCTCCTGTCTTGTCTTCGCCACCTCCAACATGGGATGATATTATCCTCCCACCAATCCTTGGGGCGCAATATAGCTCGCCACCCCCACCAGCAATCGTCGGATACTAA 3237 0.4995 MIGSALLRSCYSTPLHEAKDLHRGGKSSTKYASSIRCTSENIPKLGPSSRTPLEKAVQEPRSIEKTEKELAESPKEDIERLILETDGVKSLIGSLHGIAGMQKQKKMMMNKKKELEEGQRRCPIPDGLPKSEEELLEEEEARMPDSPHTRLLRRMGRFPACFLKQPWGLPRWSALAMAMPHSKQALGCFILCSLFVSSLQTFLPLPPLLEDSDLAADFELKVDGNLNFENERLKKAYVALQAWKSAIYSDPFDTISNWVGRDVCSYNGVFCAPALDDPKLNVVAGIDLNHADVAGHLVPELGLLTDLALFHINSNRFCGIIPKSFERLTLMHEFDVSNNRFVGDFPSAVLTWPSVKYLDLRYNDFEGALPPQLFEKELDAVFLNNNRFTSTIPENIGQTTASVVSFANNNFTGCIPKSIGNMVNLNEIVFLGNGLGGCLPQEIGKLANVQVFDASHNEFIGTLPNLSGLKSMEVIHISDNELSGYVSDTICKLPMLKNFTFSKNYFNGEAQACLPTSRGNVVFDDTDNCLPARQNQKATKQCIPVVTRLVDCSKNCGGGGDGAPSTPKPTPTPTPVPNPPKIESPKVETPKVKSPPTPSPTPIPSSPKVETPKAKPPPTPSPTSVPSPPKTESPKVETPKAKPPPTLSPTPIPSPPKTELPKVEMPKAKPPPTPSLTSVPSPPKTETPKVETPKVKPPPTPSPTPIQSPPKTESPKVETPKAKPPPTPSPTPVPSPPKTESPKVETPKAKPPPTPSPTPVPSPPKIESPKIETPKAKPPPTPSSTLVPSPPKTESPKIETPKAKPPPTPSPTPVSSPPKTESPKVETPNAKPPPTPSPTLVPSPPLPIHSPPPLVHSPPPPVHSPPPPMHSPPPPVHSPPPPVQSPPPLVHSPPPPMHSPPPPVHSPPPPVHSPPPPVQSPPPPIHSPPPPVQSPPPPPVHSPPPPMHSPPPPVQSPPPPVHSPPPPVQSPPPPPVHSPPPPVHSPPPPVYSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVYSPPPPVLSSPPPTWDDIILPPILGAQYSSPPPPAIVGY 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0316 1078 Coils Coil 98 121 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 800 818 - -
Glsi01g0316 1078 Pfam Leucine rich repeat N-terminal domain 238 271 IPR013210 -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 18 74 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 692 710 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 591 681 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 566 584 - -
Glsi01g0316 1078 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 236 534 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 27 46 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 559 1078 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 719 789 - -
Glsi01g0316 1078 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 200 699 - -
Glsi01g0316 1078 Gene3D Ribonuclease Inhibitor 235 530 IPR032675 -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 827 1057 - -
Glsi01g0316 1078 MobiDBLite consensus disorder prediction 57 74 - -
Glsi01g0316 1078 SUPERFAMILY L domain-like 237 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0316 Glsi-ChrGlsi01 2594721 2601067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0316 186 774 Trihelix Transcription Factor Family AT3G19020 54.545 0.0 566