Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0296 ATGGCTTCTAATAAACTCTTCTTCTGCTTCAATATCTTTATCTGTTGGCTTGTTTCCTTGTCTCACCTTGTTCATATGTTTCCCTTTTATCATTCAAGCCTGCTTGACTATAATTTCTATGGCACATCATGCCCTAACTTGCTGGAGATGGTTAGATTTGGTGTTCAGTCTGCCACAGAAAACGACCCCAGAATGGCTGCTTCCCTCCTTCGATTGCACTTTCACGATTGTATTGTAGCTGGGTGTGATGCATCAGTGCTTCTGGACGACACAGCAGAATTCACAGGAGAAAAGAATGCCTTCCCTAATCGTAATTCACTTCGAGGTTATGAGGTGATTGATAACATAAAAGCCGATGTTGAAAGGTACTGCCCTTCAACTGTTTCTTGTGCTGACATCTTAGCCCTTGCAGCAAGAGAAGCTGTTGTTCTGTCTGGAGGGCCTTTTTGGTCTGTTGGATTAGGCCGAAGAGATTCAACAACAGCAAGTCAGGATGCGGCTAATAAACAGATTCCCAGTCCTTTTGAGCCTCTGGACAATATCACAGCGAAGTTCACTTCAAAGGGTCTTGACATCTCGGATGTAGTTGCCCTTTCAGGAGCACACACCATTGGTTTTTCCCAATGTTCCAGCTTCAAAGGGAGACTTTTTGACTTTCAAGGCACTGGCAAATCAGATCCTGCGCTTGACACTGCCCTTCTTTCAAATTTGCAAAGCATGTGTCCAAATAAAAACGCATCAAATAGCAATCTAGCTCCCCTTGATGCTGGTAGCACTTTCAGGTTTGACAATTCATATTACTCAAATCTGGAAAGGAACTCTGGCCTGCTTCAATCTGATCAGGCCTTAACTGGGGATCGAAGGACTGTTGCTTTGGTCCAATTCTACAGTGGTAACGAACTAGCCTTCATTTATGGATTTGCAAATTCCATGGCGAAGCTTAGTAATGTTGGAGTAATCACAGGGATGAATGGGCAAGTTAGAAAGAAATGTGGGTCTGTGAACTAA 1008 0.4345 MASNKLFFCFNIFICWLVSLSHLVHMFPFYHSSLLDYNFYGTSCPNLLEMVRFGVQSATENDPRMAASLLRLHFHDCIVAGCDASVLLDDTAEFTGEKNAFPNRNSLRGYEVIDNIKADVERYCPSTVSCADILALAAREAVVLSGGPFWSVGLGRRDSTTASQDAANKQIPSPFEPLDNITAKFTSKGLDISDVVALSGAHTIGFSQCSSFKGRLFDFQGTGKSDPALDTALLSNLQSMCPNKNASNSNLAPLDAGSTFRFDNSYYSNLERNSGLLQSDQALTGDRRTVALVQFYSGNELAFIYGFANSMAKLSNVGVITGMNGQVRKKCGSVN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0296 335 PANTHER PEROXIDASE 72-RELATED 34 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 SUPERFAMILY Heme-dependent peroxidases 35 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 FunFam Peroxidase 38 186 - -
Glsi01g0296 335 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 CDD secretory_peroxidase 35 334 IPR033905 GO:0004601|GO:0042744
Glsi01g0296 335 ProSiteProfiles Plant heme peroxidase family profile. 34 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Glsi01g0296 335 Pfam Peroxidase 55 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 FunFam Peroxidase 172 314 - -
Glsi01g0296 335 Gene3D - 38 335 - -
Glsi01g0296 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Glsi01g0296 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0296 335 Gene3D Peroxidase, domain 2 172 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0296 Glsi-ChrGlsi01 2429856 2433124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0296 32 332 Peroxidase AT1G49570 61.056 4.07e-130 374