Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0263 ATGTGGCCAAACCAGGCTTCCTGCACTCCCCTTCAACATGATTCTCTGCATGATCCCAAGAGGCTAAAAAACGATACTATTGTTGCTGGGGGTTCTGCATTGACAGTGTCAGATAAAGTACAAAGGATTTTCAGTGAAAAGAACCAGAATTCGATGGAAAAATGTGAGGGGAACTTGCATCCTAGAAGATTCGTAATTAAGGAATTAAGAGAAAATGGGAATGGATCATCAATCCCCAAAAATGAACAAGATGGAACATCATGGAGTACTGCAAGTGGAAGCGAGGGATCAACAGATGAAGGCCTTGACACTAACAATGGTTTTCCTTCAAGTAATAAGCAGCAATGTGAGATGATGCTTGCAAATGGGGAAGTTGCACAGAAGGTGGCTACACTGGAAAATTGTAATGCAAATCATGTGGATAAAAATTCTTCATTACAGCAATTTGCAGTGAATTCAACTGAACTGAATCTGAGTTCAGGAACTGGTCTCAATGTATCTGGGGCTACCCCTGACCCTGCGAAGCTGGAAGAAGATGAAAGAAGAAAAGAAAGAAAAAGGCAGTTAAATAGAGAATCAGCTAGGAGATCAAGGTTACGTAAGCAGCAAGAATGTGATGAACTACACAAAACTGTGGACACTCTTGTGATCGAGAATTCCTTGCTCAAGGACAAGCTCATGAGCCTTTCTGAGGACTGTCTGGAGCTTAACAACGAAAACAACTCCATTGAGGAAGAGGTCGTCAAGATATACGGGATAGAATCAATTGCTGATCTTCTAGCAATGAAGCCCGACGGAGTGTCTCATTAA 810 0.4185 MWPNQASCTPLQHDSLHDPKRLKNDTIVAGGSALTVSDKVQRIFSEKNQNSMEKCEGNLHPRRFVIKELRENGNGSSIPKNEQDGTSWSTASGSEGSTDEGLDTNNGFPSSNKQQCEMMLANGEVAQKVATLENCNANHVDKNSSLQQFAVNSTELNLSSGTGLNVSGATPDPAKLEEDERRKERKRQLNRESARRSRLRKQQECDELHKTVDTLVIENSLLKDKLMSLSEDCLELNNENNSIEEEVVKIYGIESIADLLAMKPDGVSH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0263 269 MobiDBLite consensus disorder prediction 74 113 - -
Glsi01g0263 269 MobiDBLite consensus disorder prediction 1 20 - -
Glsi01g0263 269 PANTHER G-BOX-BINDING FACTOR 3-RELATED 60 249 IPR044827 GO:0003700|GO:0006355|GO:0043565
Glsi01g0263 269 Coils Coil 176 202 - -
Glsi01g0263 269 SMART brlzneu 177 242 IPR004827 GO:0003700|GO:0006355
Glsi01g0263 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700|GO:0006355
Glsi01g0263 269 Gene3D - 180 235 - -
Glsi01g0263 269 Coils Coil 219 246 - -
Glsi01g0263 269 MobiDBLite consensus disorder prediction 70 113 - -
Glsi01g0263 269 CDD bZIP_plant_GBF1 183 233 IPR045314 GO:0003700|GO:0006355
Glsi01g0263 269 MobiDBLite consensus disorder prediction 173 198 - -
Glsi01g0263 269 SUPERFAMILY Leucine zipper domain 182 237 IPR046347 GO:0003700|GO:0006355
Glsi01g0263 269 Pfam bZIP transcription factor 178 240 IPR004827 GO:0003700|GO:0006355
Glsi01g0263 269 MobiDBLite consensus disorder prediction 158 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0263 Glsi-ChrGlsi01 2184562 2188056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0263 84 259 bZIP Transcription Factor Family AT4G36730 34.807 3.39e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi01g0263 bZIP_1 1.3e-13 CL0018