Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0156 ATGGATATGAAGTTCCCTCTGCAATCTCTGCAACTTCCAACCATTCTTTTCTTTCTCTTTTCCCTCTGTGTTTTCATTGTCTTCTTGCTTCGCCTACGTACCAAACGCCCATACCCACCAGGCCCACGTGGGCTACCCATCATCGGAAACATGCCGATGATGGACCAACTCACCCACCGCGGCTTGGCCCAGCTCGCCCAAAAGTACGGCGGGCTTTTCCATCTCAAAATGGGCGTCCTCCACATTGTAGCCGTATCAACACCTGATATCGCCCGCGAGGTACTCCAGGCCCAAGACAGCGTCTTCTCAAACCGGCCTGCAAATGTTGCTATCTCCTACTTGACCTATGACCGGGCTGACATGGCCTTCGCCAACTACGGCCCGTTTTGGCGACAGATGCGTAAAATCTGTGTGATGAAATTGTTCAGCCGAAAACGGGCCGAATCTTGGGCTTCCGTACGAGAGGAGGTGGATAGAACGGTTCGAGCCGTGGCAAGGGAGACAGGTTCGTTGGTTAACTTGGGCGAGCTGGTTTTTGATCTAACTAGGAGTATCACCTACAAGGCCGCGTTTGGGAGCAGCTTGAATGAAGGACAAGAGGAGTTCATGAAAATATTGCAGGAGTTTTCGAAGCTATTTGGAGCGTTTAACATGGGAGATTTTATTCCGTGGTTGGGTTGGTTTCATTCGCAAGAGTTTAAGAAAAGAATGGCCAGAGCACGAAATGCACTTGATGTGTTTATCGACAAGATCATTGACGATCACGTGACAAAGAGGAAGAACACCGGGAATAAGGATCAAAATGAGAAAGAAGGAGATAGAGATATGGTTGACGAACTCATGGTCTTTCTCGATGAAGGAAGTGGAGGTGGTAATACTGATTTGGGAAATTCCCAACCTGTCCTCAAGCTCACTAGAGATAACATTAAGGCTCTTATCATGGACGTTATGTTTGGTGGGACCGAAACCGTTGCTTCGGTGATAGAATGGACCTTGGCGGAGCTCATGAAAAGCCCAATGGACCTCGAGAAGGTCCAACAAGAGCTCGTTGAAGTTGTGGGCTTAGACCGTAGATTCCAAGAAGCCGATCTGGAGAAATTGACTTACCTCCGATGCGCGGTCAAAGAAACCTTGCGGCTCCACCCCCCAATCCCGCTCCTCCTCCACGAGACCGCCGAGGATAGCGTCGTCGCCGGCTACTCCATTCCCGCAGGTTCGCGAGTATGGATCAACGCGTGGGCCATTGCCCGTGACAAGAGCGCGTGGGACGATCCAGAAACGTTCAATCCGTCGAGGTTCCTGAAAGACGAAGCACCGGATTTCAAAGGAAGCAGCTTCGAATTCATCCCATTCGGGTCGGGTCGAAGGTCGTGTCCCGGTATGCAACTTGGAGTTTATGCTCTGGAGATGACGGTGGCTGATCTGCTTCACTGTTTCAAATGGGAGTTGCCGAACGGAATGAAGCCGAGTGAGCTTGATATGAACGACGTGTTTGGACTCACTGCTCCGAGAGCGATTCAACTCGTTGCGGTACCGAGTTATAGATTGAATTGTCCTCTTGGTGATTCTTAA 1572 0.5038 MDMKFPLQSLQLPTILFFLFSLCVFIVFLLRLRTKRPYPPGPRGLPIIGNMPMMDQLTHRGLAQLAQKYGGLFHLKMGVLHIVAVSTPDIAREVLQAQDSVFSNRPANVAISYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVDRTVRAVARETGSLVNLGELVFDLTRSITYKAAFGSSLNEGQEEFMKILQEFSKLFGAFNMGDFIPWLGWFHSQEFKKRMARARNALDVFIDKIIDDHVTKRKNTGNKDQNEKEGDRDMVDELMVFLDEGSGGGNTDLGNSQPVLKLTRDNIKALIMDVMFGGTETVASVIEWTLAELMKSPMDLEKVQQELVEVVGLDRRFQEADLEKLTYLRCAVKETLRLHPPIPLLLHETAEDSVVAGYSIPAGSRVWINAWAIARDKSAWDDPETFNPSRFLKDEAPDFKGSSFEFIPFGSGRRSCPGMQLGVYALEMTVADLLHCFKWELPNGMKPSELDMNDVFGLTAPRAIQLVAVPSYRLNCPLGDS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0156 523 Gene3D Cytochrome P450 31 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 FunFam Cytochrome P450 84A1 31 514 - -
Glsi01g0156 523 SUPERFAMILY Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 Pfam Cytochrome P450 39 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Glsi01g0156 523 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0156 523 PANTHER CYTOCHROME P450 84A1-RELATED 11 520 - -
Glsi01g0156 523 CDD CYP71-like 68 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0156 Glsi-ChrGlsi01 1282349 1284624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0156 7 520 Monolignol Biosynthesis Gene Families AT4G36220 66.151 0.0 679