Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0153 ATGACTCACACAGAAGAAACCAAGGATGACAAGAATGGTGCTGGTGACAAGGTGGAAGAAGAACAAAGGCTTTTGACAGAGGAAGAGTCTAGAAAGAATCATGAAGAGAAGCCAACAGTTGTTGATGAACCAGGAAAAGTAGATGGGGAAATGCAAGATCGTCGTGATGTTAAAGAATGCGAAGAAGATGGTTCCAAGGTTGATCAAAAGCACCGTGGTATAACATTAGCAGCAGAGGGTTGTATTGGTAATGAGGAGGAGTCTGAAAAAAATCAAGAAGAGCCAACAATTGTTGATGACCCAGCAAAAGTAGAAGGTGGACAAAATGATGTTAAAGAATGCGAAGATTTAGTTTCCAAGGGAATCGGACAGAACATGTCGCAAGGTGTTTCCAAGGTTGATCAAAAGCACCCTGGGATGAGACTAGCAGCAGAGGGTTGTGTTGAAAATGTGGAGAACATAAGCAAGGGCTTAATTTCATCAGTTGACAGCACTGAAGATGAGAGGCACGACAAGAATGTTTCAACAACTGCAGCTTCTTTCTCCTCCGACCATCCTGCAAGTGTCCATGATGAGGATTCCGACCAAAAAAGCCCCAAAAAGAAAGAGGATAAAGCATCAAGCACCCTTGCCGACAGTACATTCTGCAACTGTGACGAGCGTCAGTGTATAGGCCTTTGTTGTGCTTGTTTTGCTGCCGGATTATATTGTGATGAGCGTTGTGGTTGCGAAGACTGCAGTAATGTTTCTGAATATGATGATCTCATTACTGAGGAAAAGCAAAACATCGAATGCCGTAGCTTACTCGTCAATCAGGGTGATTCCACTCCATCGTCACCATCAGCTCCCGTAAGGCATATAGTTTGCCGTTGCGAAAGGGTTATTTTGGATGCTGCCCTTCATGCTTATGCGCGGAATGTAACAATGTCCATGGCAGAAAAGAAGATTAAGAGATTGTGCAAAATATTGATGGAGGTGAACGAAGACGACGCTGGAGGAGGACGTCAAGGTCGAAATTCTGTTCCTGATGATAACCCTAACCCTTCTCAAATTAGAGGATTCAAAGGGAAATCGTGTAAAGGATGCCTATACTACTCATCAATTCATAATTCCAAGTCTAAAAATCCCACATGCGTTGGTTTCTCCAGAACGCTCCAGCAAGTACCTTCTGACATGGTGGGACAAACTGAGCTGGAAACTTCAAAAGAAGGCCGCAGTCTTAGAGATTTCAAGTATGCATGTATTGGACACTCCATTTACTTAGACAACGAAGTTTCTTCAGCTGACCCACGGGATAAAACAGCAAAAATGTTCTTTTGTGTTGGTCTCGAGGTGTTGCTGGACAAACAGCCTGTTGGCCATGTTCCAGCTCCGGCTCCTAAAAATGAAGGACATGAACATGCTACTCCTCAATTTCAACCACAACCACAAAGATATAATCAACCTCCTCGCAGCACAGGGGAAGTATACTTTAACAGGTTTAAAAGAAATGCAAGTATAGTGGTGTCAGGCTGTGCAAGAAACGTTTACAGGGTGCATAAATATATAAAAGAGACCTTGGATGACATTGTAGATCCTTACCGTAGGCGTCCCAAGTAA 1599 0.4334 MTHTEETKDDKNGAGDKVEEEQRLLTEEESRKNHEEKPTVVDEPGKVDGEMQDRRDVKECEEDGSKVDQKHRGITLAAEGCIGNEEESEKNQEEPTIVDDPAKVEGGQNDVKECEDLVSKGIGQNMSQGVSKVDQKHPGMRLAAEGCVENVENISKGLISSVDSTEDERHDKNVSTTAASFSSDHPASVHDEDSDQKSPKKKEDKASSTLADSTFCNCDERQCIGLCCACFAAGLYCDERCGCEDCSNVSEYDDLITEEKQNIECRSLLVNQGDSTPSSPSAPVRHIVCRCERVILDAALHAYARNVTMSMAEKKIKRLCKILMEVNEDDAGGGRQGRNSVPDDNPNPSQIRGFKGKSCKGCLYYSSIHNSKSKNPTCVGFSRTLQQVPSDMVGQTELETSKEGRSLRDFKYACIGHSIYLDNEVSSADPRDKTAKMFFCVGLEVLLDKQPVGHVPAPAPKNEGHEHATPQFQPQPQRYNQPPRSTGEVYFNRFKRNASIVVSGCARNVYRVHKYIKETLDDIVDPYRRRPK 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0153 532 MobiDBLite consensus disorder prediction 330 352 - -
Glsi01g0153 532 MobiDBLite consensus disorder prediction 186 206 - -
Glsi01g0153 532 MobiDBLite consensus disorder prediction 83 109 - -
Glsi01g0153 532 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 215 248 IPR005172 -
Glsi01g0153 532 SMART CXC_2 211 252 IPR033467 -
Glsi01g0153 532 Coils Coil 17 37 - -
Glsi01g0153 532 MobiDBLite consensus disorder prediction 456 484 - -
Glsi01g0153 532 PANTHER ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 339 532 - -
Glsi01g0153 532 MobiDBLite consensus disorder prediction 468 484 - -
Glsi01g0153 532 MobiDBLite consensus disorder prediction 1 109 - -
Glsi01g0153 532 MobiDBLite consensus disorder prediction 1 73 - -
Glsi01g0153 532 MobiDBLite consensus disorder prediction 159 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0153 Glsi-ChrGlsi01 1253931 1261951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0153 139 270 CPP Transcription Factor Family AT4G14770 31.429 1.24e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Glsi01g0153 TCR 4.4e-06 No_clan