Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0151 ATGAAGCTCCCCAATTCCTCTTACCTTGCTCTGTTTCTTCTGTTCCTCATTGGATTACCCAGTTTAGGAAGAAGCGCCCACGATTACCAAGACGCATTATCGAAGGCGATCCTCTTCTTCGAGGGCCAGCGTTCGGGGTATCTGCCAGAGGACCAGAGAATGAATTGGCGGGCTCATTCGGGTCTGAGTGATGGGTGGACCTACAATACGGACCTCACCGGCGGGTACTACGATGCCGGCGACAACGTAAAATTTGGGTTTCCGATGGCGTTCACGACCACAATGTTGGCGTGGAGCGTGATCGAATTCGGGGATGGGATGCCTCCAAAGGACCTTCGGAATGCCCTTGTGGCCATTCGTTGGGCTACCGATTATTTGCTCAAGACTGTGTCTCAGCCTAATCGGATTTTTGTTCAGGTGGGCGATCCAAGCTTAGACCACAACTGTTGGGAGAGGCCAGAGGACATGGACACAGCCAGGACCGTTTATGCTGTTGATGCGCCAAATCCGGCTTCTGATATCGCCGGGGAAACCGCGGCAGCACTCGCAGCTTCGTCCATGGCATTCCGGTCATCGGACCCGGGATATTCAGAGACCTTGCTACGGAATGCCATCAAGGCATTTCAGTATGCTGATAACTATAGAGGTGCCTATAGTGATAATGCTCATGTTAGGGATGGTGTCTGCCCATATTATTGCGATTTTGATGGCTATCAGGACGAGTTGTTATGGGGAGCGGCATGGTTAAGGAGGGCAACACAGCACGATGATTTCCTAAACTATATTCAAGGCAATGCCATCACACTTGGTGCCCACGACAACATCAATGAATTTGGTTGGGAAAACAAGCATGCTGGTCTTAATGTTCTTGTCTCCAAGGAAGCGGTAGAAGGAAGCATGTACTCTCTTGAATCCTACAAGGCCTCTGCAGAGAGCTTCATGTGCTCCCTAATCCCCCAATCACCAACCTCCCACATTCCCCACTCTCCTGGCGGCCTCATTTTCAGACCCGGCGGCAGCAATCTACAGCACGCTACTTCCATCTCTTTCCTCGAGCTAGTCTATGCCAATTACCTCTCCCGCACCTCCCAGACCATCACCTGCGGAAACGTCGTCGTCTCTGCTCAAACCCTTCGCCAACATGCCAAGACCCAGGTTGATTACATTCTTGGCGATAACCCCATGGGACTGTCCTACATGGTTGGCTATAGGAGCTATTATCCTCTGCGGATTCACCATCGTGGATCTTCTTTGCCCTCCATTAAGGATCATCCCGAGTTCATCGCTTGTAAAGAAGGTTCGGTTTTCTTTAATTCGACAAACCCTAACCCTAATGTTCTTGTGGGAGCCATTGTTGGAGGCCCAGGGGAAGATGACGTGTACGTGGATGATCGTGCTGATTTCAGGAAGTCTGAGCCTACCACGTATATTAATGCACCTTTTGTTGGGGTTTTAGCTTACTTTGCTGCTAATCCCAACCTTAATTAG 1488 0.504 MKLPNSSYLALFLLFLIGLPSLGRSAHDYQDALSKAILFFEGQRSGYLPEDQRMNWRAHSGLSDGWTYNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVIEFGDGMPPKDLRNALVAIRWATDYLLKTVSQPNRIFVQVGDPSLDHNCWERPEDMDTARTVYAVDAPNPASDIAGETAAALAASSMAFRSSDPGYSETLLRNAIKAFQYADNYRGAYSDNAHVRDGVCPYYCDFDGYQDELLWGAAWLRRATQHDDFLNYIQGNAITLGAHDNINEFGWENKHAGLNVLVSKEAVEGSMYSLESYKASAESFMCSLIPQSPTSHIPHSPGGLIFRPGGSNLQHATSISFLELVYANYLSRTSQTITCGNVVVSAQTLRQHAKTQVDYILGDNPMGLSYMVGYRSYYPLRIHHRGSSLPSIKDHPEFIACKEGSVFFNSTNPNPNVLVGAIVGGPGEDDVYVDDRADFRKSEPTTYINAPFVGVLAYFAANPNLN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0151 495 Gene3D - 25 491 IPR012341 GO:0005975
Glsi01g0151 495 PANTHER ENDO-1,4-BETA-GLUCANASE 11 490 - -
Glsi01g0151 495 SUPERFAMILY Six-hairpin glycosidases 8 490 IPR008928 GO:0005975
Glsi01g0151 495 Pfam Glycosyl hydrolase family 9 29 485 IPR001701 GO:0004553|GO:0005975
Glsi01g0151 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Glsi01g0151 495 FunFam Endoglucanase 25 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0151 Glsi-ChrGlsi01 1225769 1229207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0151 10 491 Glycoside Hydrolase AT1G70710 58.921 0.0 594