Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0140 ATGGGTGACACTGAAGAAGCCAATACTGATATGATGCAAAGGCTTCAATCCTCATTCGGGACTTCTTCATCTTCGATTTTGAAGCAACCTTTAAATATGGACCAGCTCAGTATACCCCAATTCAATCCCTCACAAATGCGCGCTCGGCATTTTCAGCAGAATTTTGGTGGAGATAACAATAAAAGAGTAGGAATACCGCCATCACATCCCCATCAGATCCCACCCATTTCGCCATATTCCCAGATCCCAGTGTCGCGGCCAACGACCCAGCTAATGGGCTCCCAGAATATTAGCCCAGGACCTACTCATTCACGATCATTGTCACAGCCGTCTTTTTTCTCGCTCGATTCACTGCCTCCCTTGAGTCCGTCTCCATTTCGTGACTCCTCGTCAACATCCATGTCAGACCCAGCTTCCGCTGATGTATCAATGGAGGATCGGGATATAAGTTCAAATTCTTTGTTGCCACCCTCACCTTTTACTAGGGGCAATCCTTCACGGGTTGGAGAGAGTTTACCCCCTCGTAAAGCACACAGGCGCTCCAACAGTGATATCCCATTTGGGTTTTCTACTGTGATGCAATCTTCACCCCCCCTTATTCCATCAAGGGGTTCAGGTGGATTAGAGCGGTCATTGTCTGGCAGAGAAAATCCAGGTATGGCGAAGCCTGCACACTTAGTTAAAAAGGAAACTAGTTTGATAAAAACTGTTGAACACAGTGTAGAGGGCACCGGTGAGAAGAAATCCCCTGAAGGGGAAGCTGTGGATGATCTTTTCTCTGCATACATGAATTTGGATAACATTGATGCACTGAACTCTTCCGGGACTGATGACAAAAATGGTATCGAAAATCGTGATGATTTGGATAGTAGAGCTAGTGGAACAAAAACAAATGGAGGTGATAGCAGTGATAATGAAGCCGAAAGCAGTGTTAACGAAAGTGGGGGTGGCATTCAAAGACAGGGAATGAATACTTCAAATGAAAAAAGGGAAGGGATAAAAAGGAGTGCTGGAGGAGATATTGCACCAACCACTAGGCACTACCGGAGTGTTTCAATGGATAGTTTCATTGGTAACTTGAACTTCAACGAGGACTTGCCTAAGCTGCCACCTTCACCTGGTACTCGTCCCGGACATATTTCACCCAGCAATTCCATTGACGGTAATTCAACTACCTTTAGTTTGGAGTTCGGAAATGGTGAATTTAGTGGGCCTGAACTGAAGAAAATTATGGCAAATGAAAAACTTGCTGAGATTGCATCAGCGGATCCAAAGCGTGCAAAAAGGATTCTGGCAAATCGGCAATCAGCTGCACGGTCCAAAGAACGGAAGATGCGCTACATTTCAGAACTAGAACACAAAGTTCAGACTCTACAGACCGAAGCCACCACACTCTCTGCGCAACTTACCATGTTACAGAGAGATTCTGTTGGACTTACTAACCAAAATAATGAGTTGAAGTTCCGTCTTCAATCCATGGAACAGCAGGCCAAACTCCGAGATGCTCTGAACGAAGCCTTAACTGGTGAGGTTCAACGGCTGAAAATTGCGACAGCTGAATTGAAATTGAATGTAGAGTCTCACCCTTCCAGCCGCATGATCCACCAGCATTCTGTCAACCCTCAGATGTTCCAGCTGCAGCAGCAGCAGCAGACGACACAACAACCTACTTCCCAATTGAACATTCATCTGCAGCAACAGCAGCAGAATGGTAGCACCACCTCAAAGACTGACTCAAAACAGTAG 1746 0.4582 MGDTEEANTDMMQRLQSSFGTSSSSILKQPLNMDQLSIPQFNPSQMRARHFQQNFGGDNNKRVGIPPSHPHQIPPISPYSQIPVSRPTTQLMGSQNISPGPTHSRSLSQPSFFSLDSLPPLSPSPFRDSSSTSMSDPASADVSMEDRDISSNSLLPPSPFTRGNPSRVGESLPPRKAHRRSNSDIPFGFSTVMQSSPPLIPSRGSGGLERSLSGRENPGMAKPAHLVKKETSLIKTVEHSVEGTGEKKSPEGEAVDDLFSAYMNLDNIDALNSSGTDDKNGIENRDDLDSRASGTKTNGGDSSDNEAESSVNESGGGIQRQGMNTSNEKREGIKRSAGGDIAPTTRHYRSVSMDSFIGNLNFNEDLPKLPPSPGTRPGHISPSNSIDGNSTTFSLEFGNGEFSGPELKKIMANEKLAEIASADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTMLQRDSVGLTNQNNELKFRLQSMEQQAKLRDALNEALTGEVQRLKIATAELKLNVESHPSSRMIHQHSVNPQMFQLQQQQQTTQQPTSQLNIHLQQQQQNGSTTSKTDSKQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0140 581 MobiDBLite consensus disorder prediction 1 37 - -
Glsi01g0140 581 Pfam bZIP transcription factor 425 479 IPR004827 GO:0003700|GO:0006355
Glsi01g0140 581 SMART brlzneu 421 485 IPR004827 GO:0003700|GO:0006355
Glsi01g0140 581 MobiDBLite consensus disorder prediction 293 326 - -
Glsi01g0140 581 MobiDBLite consensus disorder prediction 9 37 - -
Glsi01g0140 581 MobiDBLite consensus disorder prediction 82 160 - -
Glsi01g0140 581 MobiDBLite consensus disorder prediction 228 254 - -
Glsi01g0140 581 MobiDBLite consensus disorder prediction 50 255 - -
Glsi01g0140 581 FunFam probable transcription factor PosF21 424 477 - -
Glsi01g0140 581 MobiDBLite consensus disorder prediction 271 346 - -
Glsi01g0140 581 CDD bZIP_plant_RF2 426 475 IPR044759 GO:0003700|GO:0006355
Glsi01g0140 581 SUPERFAMILY Leucine zipper domain 425 476 IPR046347 GO:0003700|GO:0006355
Glsi01g0140 581 Coils Coil 441 496 - -
Glsi01g0140 581 MobiDBLite consensus disorder prediction 184 201 - -
Glsi01g0140 581 MobiDBLite consensus disorder prediction 545 581 - -
Glsi01g0140 581 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 423 486 IPR004827 GO:0003700|GO:0006355
Glsi01g0140 581 Coils Coil 504 524 - -
Glsi01g0140 581 Gene3D - 424 476 - -
Glsi01g0140 581 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 125 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0140 Glsi-ChrGlsi01 1149749 1153801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0140 1 545 bZIP Transcription Factor Family AT4G38900 61.812 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi01g0140 bZIP_1 6.8e-09 CL0018