Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0139 ATGATTTGTTTCATCGTACTACATTCTAAGAGAGCTATCAAATCAATCGTCATATTCATATCTGTGGAAGTGCCAAATGCAAGTAGCTATTGGTTGTGCATGGCATCGACTCGTCACGACATGGACGAGTCCGTGACGGATACCATTCAAGGTTCCCAGATGTCGGGAGAGCAACCAGCATCCAACTCCCATGGGTTAACTCAGCAAACGCCAGAGCAACTCGTGGCCAGGGCCATAGCTCCTGTGAAGGCGGAGTTCCTTCGTCCTCCTCCTGTTCGAACTTCCTCTGCAAGTCAAAACGATGTCATTGCTGATGATACCAAGGATAAGACCTCTGCTCAATCCGGATTGGTGAAGGAGAAGAAGTCGAAGCGCCAGCTCAAGCGTGAGCGTCGTCAGGAGCAGAAGACTGCAAGAAACATCTGTCCAGAAATTGCAAAGACAGGAGATATTAGTTCATGTCCTTATAATGACAAATGCCGCTTCAGCCATGACTTAGAAGCCTTCAAGGCCCAGAAACCAGCTGATCTAGAGGGAGAATGTCCTTTCTTTAAAGCTGAAGGTTCTTGCCGTTTTGGGTTAGCGTGTAGATTTTCAAGTACACATACAGATCATATGCCATCTGACAATATGAATGGTAGGAAAAAAAGTTCCGAGATTAATGGACTGAGCAAAGATGTTCAAAAACTTTTGTGGAAAAATAAGATGCGCTTCCCAAAGGCTGATGAGAAACTCAGAGTGCTAGGGCTCTTGGGACCATCTAAGTCAAAAAAGAATGACATGGATGATAAGGAGGATGGCAACACTGATTCAAATAATTGCCAACATGCTGTTGATAATGGTTCTTGTGAAGTAACCTATGACTCAGGTTCTAAGTTAGAAAACTCTACTGAAGTCACAAAAGATGATGGTATAGATGGGAATTTTGAATCTGATGTAATTTTCCTTCAAAAGAGAAGAAAAACTGAAGAAAATTATGGTCCTGGTGGGGCAGAAAATGAAGGTGTGCTTGTTACTGACCAAGTTGTTGGGGAAAGCTGCATACAAGCTGAACCAGAAGCAGGAACTGATGTCATACCCCCAGAAACTGATCAAAGCATAAAGTTACACCCACGCGAAAAGATGCTTATTGATTTTAGGGATAAGTTGTATCTTGCACCCTTGACCACTGTTGGAAATCTCCCTTTCAGGAGGGTTTGCAAAGTATTAGGTGCTGATGTAACATGTGGTGAAATGGCATTGTGCACAAATCTTTTGCAGGGTCAAGCATCAGAATGGGCATTGCTAAGACGTCATTCATCTGAAGATCTATTTGGTGTACAAATATGCGGGGCATATCCAGATACTGTAGCACGAACCGTAGAACTAATAGAGCAGGAATGTAAAATAGATTTTATTGATATCAATATGGGTTGCCCCATTGATATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTTACAAAACCAATGCGGATGAAAAGTATTGTCAAAGTAGCTTCAGGCACAGTGGATAAACCAATAACTATCAAGGTACGGACAGGTTATTTTGAAGGGAAAAATCGCATTGATTCTTTGATCGCAGACATGAGCTCTTGGGGAGCCAGTGCAATAGCAGTACATGGTAGGTCACGTCAGCAACGCTATAGCAAGCTTGCTGACTGGGACTATATATACCAGTGTGCAAGACAGGACCCTAATTCTTTGCAAGTAATTGGTAATGGAGATGTTTTTTCATTCCTTGACTGGAACAACCACAAGGCTGAATGCTCTGAACTTGCAACATGCATGATTGCTCGTGGAGCACTGATTAAGCCTTGGATATTTACAGAGATTAAGGAACAGAGGCATTGGGACATTAGTTCTGGCGAACGATTAAATATTTTGAAAGATTTTGTACATTTTGGCCTTGACCACTGGGGATCTGATACAAAAGGAGTGGAGACAACCAGGCGGTTCATGTTGGAATGGCTTAGCTACACATGTAGATATATACCTGTTGGCCTTTTAGATGTTATTCCACAACGACTAAACTGGCGTCCACCATCTTACTATGGCCGTGATGACCTTGAGACTCTAATGGCCTCAGACTCAGCAGCTGACTGGATACGGATATCAGAGTTGTTGCTTGGCAAGGTCCCAGATGGCTTCACATTTGCTCCCAAGCATAAATCCAATGCTTACGATAGAGCTGAAAATGGTTGA 2205 0.4295 MICFIVLHSKRAIKSIVIFISVEVPNASSYWLCMASTRHDMDESVTDTIQGSQMSGEQPASNSHGLTQQTPEQLVARAIAPVKAEFLRPPPVRTSSASQNDVIADDTKDKTSAQSGLVKEKKSKRQLKRERRQEQKTARNICPEIAKTGDISSCPYNDKCRFSHDLEAFKAQKPADLEGECPFFKAEGSCRFGLACRFSSTHTDHMPSDNMNGRKKSSEINGLSKDVQKLLWKNKMRFPKADEKLRVLGLLGPSKSKKNDMDDKEDGNTDSNNCQHAVDNGSCEVTYDSGSKLENSTEVTKDDGIDGNFESDVIFLQKRRKTEENYGPGGAENEGVLVTDQVVGESCIQAEPEAGTDVIPPETDQSIKLHPREKMLIDFRDKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMALCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECKIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSIVKVASGTVDKPITIKVRTGYFEGKNRIDSLIADMSSWGASAIAVHGRSRQQRYSKLADWDYIYQCARQDPNSLQVIGNGDVFSFLDWNNHKAECSELATCMIARGALIKPWIFTEIKEQRHWDISSGERLNILKDFVHFGLDHWGSDTKGVETTRRFMLEWLSYTCRYIPVGLLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWIRISELLLGKVPDGFTFAPKHKSNAYDRAENG 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0139 734 Coils Coil 117 137 - -
Glsi01g0139 734 MobiDBLite consensus disorder prediction 103 123 - -
Glsi01g0139 734 CDD DUS_like_FMN 382 617 IPR035587 -
Glsi01g0139 734 ProSitePatterns Uncharacterized protein family UPF0034 signature. 466 484 IPR018517 GO:0008033|GO:0017150|GO:0050660
Glsi01g0139 734 ProSiteProfiles Zinc finger C3H1-type profile. 180 205 IPR000571 GO:0046872
Glsi01g0139 734 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 69 728 - -
Glsi01g0139 734 SUPERFAMILY FMN-linked oxidoreductases 382 695 - -
Glsi01g0139 734 Gene3D Aldolase class I 378 620 IPR013785 -
Glsi01g0139 734 MobiDBLite consensus disorder prediction 43 67 - -
Glsi01g0139 734 MobiDBLite consensus disorder prediction 250 279 - -
Glsi01g0139 734 MobiDBLite consensus disorder prediction 46 67 - -
Glsi01g0139 734 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 378 620 - -
Glsi01g0139 734 Pfam Dihydrouridine synthase (Dus) 385 619 IPR035587 -
Glsi01g0139 734 MobiDBLite consensus disorder prediction 87 141 - -
Glsi01g0139 734 ProSiteProfiles Zinc finger C3H1-type profile. 136 167 IPR000571 GO:0046872
Glsi01g0139 734 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 132 212 - -
Glsi01g0139 734 MobiDBLite consensus disorder prediction 256 270 - -
Glsi01g0139 734 Gene3D - 131 215 - -
Glsi01g0139 734 SMART c3hfinal6 138 166 IPR000571 GO:0046872
Glsi01g0139 734 SMART c3hfinal6 177 204 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Glsi01g0139 Dus 7.9e-51 CL0036