Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0138 ATGGCTGCAACCAATCTTTCTACTTTGTCCTGCTCCCTTTCAAAACGCTCTTCTCTCCCTCTCGACACTTCTAGCTCCCATACTTCTTTCCCATACAAAACCCTCTCAAAACCCTCCTCCTTTTCCAAAACAACTTTTTCACACGCTGCCCTGGAGGAGACCCACAAAGCCTCTTTTGCAGTTTCATCCAAAAATCCGATTTCTGATATTGTCTGTGCAAATAAGCCATGCCCAGAAGGCCACTATGATTATGATGATGACGAAAAGCCCCGTGAGGAGTGTGGTGTGGTGGGTATATATGGTGACTCAGAAGCTTCGCGTCTTTGCTATTTGGCCCTGCACGCTCTGCAGCACCGTGGGCAGGAAGGTGCTGGGATTGTGGCCGTGAACAATAACGTTCTTCAATCGATAACTGGGGTTGGGCTCGTTTCTGATGTGTTCAACGAGTCGAAGCTCGATCAATTACCCGGAGATTCCGCAATTGGGCATGTTCGATACTCAACCGCAGGCCAGTCGATGCTCAAGAATGTTCAACCCTTCGTTGCAGGGTACCGTTTTGGGTCTGTTGGGGTTGCTCACAATGGCAATTTGGTGAATTATCAAACCTTAAGGGCGCAGCTTGAAGAAAATGGGTCAATTTTTAACACGAGTTCTGATACTGAGGTCGTGCTTCATCTTATTGCTACTTCACAGCACAGGCCCTTCCTTTTGAGGATTGTTGATGCCTGCGAGAAGCTTGAAGGGGCCTATTCTATTGTTTTTATTACAGAGGATAAGCTGGTTGCTGCGAGGGATCCATTCGGATTTCGACCTTTGGTTATGGGGAGGAGAAGTAATGGTGCCATTGTCTTCGCCTCCGAAACTTGTGCTCTTGATTTGATTGAAGCCACATATGAAAGGGAGGTTTACCCAGGTGAAGTTATTGTGGTGGACAAGAATGGGCTTCAATCCCTTTGCTTAATGCCTCATCCACAACCAAAGCAATGTATCTTTGAGCATATTTACTTTGCACTTCCAAATTCTGTAGTTTTTGGAAGATCAGTATATGAATCTCGGCAAAAATTCGGGGAAATTCTGGCTACTGAAAGCCCAGTTGATTGTGATGTTGTGATCGCAGTTCCAGATTCTGGTGTGGTAGCTGCACTAGGCTATGCTGCCAAAGCTGGGGTTCCTTTTCAGCAGGGACTAATAAGGTCTCACTATGTGGGAAGAACTTTCATTGAACCATCCCAGAAGATAAGGGACTTTGGGGTGAAGCTAAAGCTCTCCCCAGTCCGTGCAGTGCTTGAAGGCAAGAGGGTTGTAGTCGTGGATGATTCAATAGTTAGAGGAACCACATCTTCCAAAATTGTAAGATTGCTTAAGGAAGCAGGTGCTAAGGAAGTTCACATGAGGATTGCTAGCCCACCCATGATTGCTTCATGTTATTATGGAGTGGACACACCAAGTTCAGAGGAATTGATCTCTAATAGGATGAAAGTAGAGGAAATAAGGGAGTTTATTGGCTCTGATTCACTTGCTTTTCTGCCATTTGATAGCTTGAAGAAGTTATTGGGCAATGATTCTCCTAATTTTTGCTATGCTTGCTTTACTGGGAAATACCCAGTTGAGCCTAGAGAACTTAAAGTGAAGAGGGTTGGTGATTTTGTGGATGATGGCTTAAATGGGAGCTTGGATGCCATTGATGAAGGTTGGGTTCAAGCAAACATAAATCAGAAAGAGCTCAAGGTGGGTAGTTTCTGA 1743 0.4509 MAATNLSTLSCSLSKRSSLPLDTSSSHTSFPYKTLSKPSSFSKTTFSHAALEETHKASFAVSSKNPISDIVCANKPCPEGHYDYDDDEKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVAVNNNVLQSITGVGLVSDVFNESKLDQLPGDSAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYQTLRAQLEENGSIFNTSSDTEVVLHLIATSQHRPFLLRIVDACEKLEGAYSIVFITEDKLVAARDPFGFRPLVMGRRSNGAIVFASETCALDLIEATYEREVYPGEVIVVDKNGLQSLCLMPHPQPKQCIFEHIYFALPNSVVFGRSVYESRQKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPMIASCYYGVDTPSSEELISNRMKVEEIREFIGSDSLAFLPFDSLKKLLGNDSPNFCYACFTGKYPVEPRELKVKRVGDFVDDGLNGSLDAIDEGWVQANINQKELKVGSF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0138 580 NCBIfam amidophosphoribosyltransferase 94 535 IPR005854 GO:0004044|GO:0009113
Glsi01g0138 580 CDD GPATase_N 94 344 IPR035584 -
Glsi01g0138 580 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 94 317 IPR029055 -
Glsi01g0138 580 Gene3D - 353 517 IPR029057 -
Glsi01g0138 580 CDD PRTases_typeI 356 467 IPR000836 -
Glsi01g0138 580 Hamap Amidophosphoribosyltransferase [purF]. 93 534 IPR005854 GO:0004044|GO:0009113
Glsi01g0138 580 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 94 535 IPR029055 -
Glsi01g0138 580 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 94 313 IPR017932 -
Glsi01g0138 580 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 92 541 - -
Glsi01g0138 580 Pfam Glutamine amidotransferase domain 172 291 IPR017932 -
Glsi01g0138 580 Pfam Phosphoribosyl transferase domain 367 463 IPR000836 -
Glsi01g0138 580 SUPERFAMILY PRTase-like 329 540 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0138 Glsi-ChrGlsi01 1131169 1132911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0138 74 567 PRT Gene Family AT2G16570 84.476 0.0 865