Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0133 ATGTTTCATTGTTATCGCGAAGCCATGCTTGTTCTGAACCGTATTGTGAGAAACTCACAAACCACGGAAATCTGCGCGATTGCACATAGCAATTTGTCACCATGTTCTTTGAAATACTGCACCAGCACTTCACTGTCTTTTAGGGTGAATTACCTTATAAACAATTTGGGGTTCTCACCAGAAATCGCTTCTGAAGTTTCCAAGCGTGTTCTTTTTGAGAAATCCGAAAAGCCAGATTCAGTGCTTACCTTGTTTAGAAACTACGGCTTCTCAGACGTTCAGATATCTAGCATAATTAAGATTCGACCTTCGCTTCTTATGGCCAATCCTGATAGAAACATTCTTCCTAAGTTGGAGTTTCTTCAGTCTAAGGGTGCCTCAAGGTCCGAACTTGTCCACATTGTGACTTCGAGTCCGAGATTCTTACTTCGAAGCTTAGAGAATTGTATAATCCCTTCTTATGATTTTTTGAAGAGATTTCTTCAGTCTGATGAACGAACAATCGAATACATAAAGCGTCGTGCGTCTTTAATTTCTGAGAATCGGGTGGCTGATAATGTTGCATTTTTGCTTGTTAATGGAGTGCCCGAGTCCAAGGCTGCTATTCTATTGTTCAGAAAGCCTCTCTCACTCAACTTAGATTCAGAATCCTTTAAAAAGGCAGTGGAGGAAGTAAAGGAAATGGGATTCAACCCTTCGACGACAGCTTTTGTCATAGCATTGCACACCAAAATTGTGGTGACCAAATCCGCGTGGAGAAGGAAGATTGATTTGTATAAGAAATGGGGTTGGTCTGAAGAAGCAACTGTTGCAGCATTTGTAAGGCGTCCATGGTGTATGGAAGTATCTGAGCGTAAGATTGGGGAAATAATGGAGTTTTTTGTTACTCATTTGGGTTGGGAATCTTTGGAAGTAGCAAAATATACAAAACTTCTCTCACTAAGCTTGCAGAAAACAATTTTACCAAGAACTTTAGTTATGCAGTCTCTTCGATCAAAGGGTTTGATTAAAAAAAATGTTAGATATGTTCATGCTTTTTTAGTGCCCGAAAAGTTATTCCTGCAGAGATTTGTGAATCGCTTTGAGGAGGAAGCTCCTCAGCTTTTGAAGCTGTACGAAGAAAAATTGAATATTTCAAAGTTCAGACTAGATGTGATTGAAATGGTAGAGGAGGAAAGAATCAGCTTTATTCCACCCTTGTACGCTATAGATGCCGGGGAAAGCCAATTTGAATGTTTTGAAAGAGGTCGTCAGCATGGTATGAGGAAGCAGTAG 1275 0.4 MFHCYREAMLVLNRIVRNSQTTEICAIAHSNLSPCSLKYCTSTSLSFRVNYLINNLGFSPEIASEVSKRVLFEKSEKPDSVLTLFRNYGFSDVQISSIIKIRPSLLMANPDRNILPKLEFLQSKGASRSELVHIVTSSPRFLLRSLENCIIPSYDFLKRFLQSDERTIEYIKRRASLISENRVADNVAFLLVNGVPESKAAILLFRKPLSLNLDSESFKKAVEEVKEMGFNPSTTAFVIALHTKIVVTKSAWRRKIDLYKKWGWSEEATVAAFVRRPWCMEVSERKIGEIMEFFVTHLGWESLEVAKYTKLLSLSLQKTILPRTLVMQSLRSKGLIKKNVRYVHAFLVPEKLFLQRFVNRFEEEAPQLLKLYEEKLNISKFRLDVIEMVEEERISFIPPLYAIDAGESQFECFERGRQHGMRKQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0133 424 Gene3D Transcription termination factor 3, mitochondrial 150 371 IPR038538 -
Glsi01g0133 424 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 SMART mt_12 168 196 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 PANTHER CGI-12 PROTEIN-RELATED 45 362 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 FunFam Mitochondrial transcription termination factor-like 146 365 - -
Glsi01g0133 424 Pfam mTERF 178 338 IPR003690 GO:0003690|GO:0006355
Glsi01g0133 424 Pfam mTERF 82 231 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0133 Glsi-ChrGlsi01 1088736 1090086 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi01g0133 mTERF 5.7e-15 No_clan