Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0131 ATGGGTTTTCGTTTGCCTGGTATCAGAAGTGCTTCATTTTCTGCAAACCACGCATCCTCAAAAGGTGTCAATGTGCCAAAGGGCTATCTTGCAGTCTATGTCGGGGAGAAAATGAAGCGTTTTGTGATTCCCATATCATACTTGAATCATCCTTCATTTCAAGACTTGCTGAGCCAAGCTGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTAACAATTCCTTGCAGTGAAGATGCTTTTGAAAGTATTACTTGTCGCTTGAATGGCATCAAAACTCAAGTCTTTCTCCTTGCCATTTTCTTCTTAACACAAAAACAAATGGGTTTTCGATTACCTGGTATCCGAAGGGCTTCATTTTCTGCAAACCATGCATCTTCAAAAGGTGTCGATGTGCCAAAGGGCTATCTTGCAGTCTATGTTGGGGAGAAAATGAAGCGGTTTGTGATTCCCATATCATACTTGAACCAACCTTCATTTCAAGACTTGCTGAGTCAGGCTGAGGAGGAATTTGGATACGACCATCCAATGGGCGGCCTCACAATGCCTTGCAGTGAAGATGCCTTTGAAAGTCTAACTTCTCGCTTGAATGGATGCTGA 603 0.4312 MGFRLPGIRSASFSANHASSKGVNVPKGYLAVYVGEKMKRFVIPISYLNHPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDAFESITCRLNGIKTQVFLLAIFFLTQKQMGFRLPGIRRASFSANHASSKGVDVPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTMPCSEDAFESLTSRLNGC 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0131 200 Pfam Auxin responsive protein 117 196 IPR003676 GO:0009733
Glsi01g0131 200 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
Glsi01g0131 200 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0131 Glsi-ChrGlsi01 1079273 1082822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0131 24 83 Calmodulin-binding Proteins AT3G43120 56.667 1.18e-18 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0131 01 1079273 1082822 Glsi01g0131 01 1079273 1082822 ECH