Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0127 ATGGGTTTTCGATTACCTGGTATTAGAAGGGCTTCATTTGCTGCAAACCTTGCATCTTCAAAAGGTGTCAATGTGCCAAAGGGCTATCTTGCTGTCTATGTTGGGGTGAAAATGAAGCGGTTTGTGATTCCCATATCATATTTAAACCAACCTTCATTTCAAGACTTGCTGAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCAATGGGTGGCCTCACAATGCCTTGCAGTGAAGATGCCTTTGAAAGTCTAACTTCTCGCTTGAATGGGTGCTGA 279 0.4265 MGFRLPGIRRASFAANLASSKGVNVPKGYLAVYVGVKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTMPCSEDAFESLTSRLNGC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0127 92 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
Glsi01g0127 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0127 Glsi-ChrGlsi01 1044438 1044716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0127 24 85 Calmodulin-binding Proteins AT3G43120 53.226 6.91e-19 74.3