Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0125 ATGGGTATTCGTCTTCCTTCCATGGTTCTAGGAGCAAAGCAAATCCTGAAGTCGCAGTATCTTCATAGCAGAAACCAGACCAATGTTCCCAAAGGCCACATAGCAGTCTATGTAGGAGAGTTTCAAAGAAAGAGATATGTGGTTCCAATATCGTACTTGAACCATCCTTCATTTCTTGACTTGTTGAACAGTGCTGAGGAAGAGTTTGGCTTCAACCATCCAATGGGTGGCCTCACAATTCCTTGCAAAGAAGATGTATTCATCAATCTTACTTCTCAACTGCGTGCCTCATGA 294 0.4286 MGIRLPSMVLGAKQILKSQYLHSRNQTNVPKGHIAVYVGEFQRKRYVVPISYLNHPSFLDLLNSAEEEFGFNHPMGGLTIPCKEDVFINLTSQLRAS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0125 97 Pfam Auxin responsive protein 12 92 IPR003676 GO:0009733
Glsi01g0125 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0125 Glsi-ChrGlsi01 1025534 1025827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0125 13 92 Calmodulin-binding Proteins AT4G34750 46.988 1.90e-17 70.5