Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0100 ATGTTTCCCTCTTCTTCTTCTTCATCCATATCCTTCCTCCAACCCTCCTTCCTGCCCAATAATCTCAAAGCCTCCAAAGTTAGAAACGCCTATTCTTCCAGAAGAATCGTTGCCGCTTCTGCTACAACCAAAAACAGGGCATCCTGTTCTTCTTCTGCTACAAAAATGGCTTCCCCCGCTTCCTTCTACGAGGTGCTTGGGATTTCAATGAGCGCGAGCTGCCACGAAATAAAGGCTGCTTACAGAAAGCTGGCAAGAACATGCCACCCAGATGTTGTATCCTTCAATCAGAAGGAAACCTCGGCGAACGAGTTCATGAAGATCCATTCTGCTTATTCGACGTTGTCAGACCCAAATAAGCGTGCTCAATATGACACAGAAATTTATAGGGATAACAGAAGACGACTTGAATATTCGTCTCTGACTTCAGAAAATATAGCCTCCATGTCTGGATATCGAAGTTACGCTCCATCTGGAAGGAAATGGGAGACTGATCAGTGTTGGTAG 507 0.4517 MFPSSSSSSISFLQPSFLPNNLKASKVRNAYSSRRIVAASATTKNRASCSSSATKMASPASFYEVLGISMSASCHEIKAAYRKLARTCHPDVVSFNQKETSANEFMKIHSAYSTLSDPNKRAQYDTEIYRDNRRRLEYSSLTSENIASMSGYRSYAPSGRKWETDQCW 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0100 168 Pfam DnaJ domain 62 125 IPR001623 -
Glsi01g0100 168 CDD DnaJ 62 117 IPR001623 -
Glsi01g0100 168 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Glsi01g0100 168 SUPERFAMILY Chaperone J-domain 55 131 IPR036869 -
Glsi01g0100 168 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 13 164 - -
Glsi01g0100 168 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Glsi01g0100 168 SMART dnaj_3 60 120 IPR001623 -
Glsi01g0100 168 PRINTS DnaJ domain signature 81 96 IPR001623 -
Glsi01g0100 168 PRINTS DnaJ domain signature 63 81 IPR001623 -
Glsi01g0100 168 PRINTS DnaJ domain signature 100 120 IPR001623 -
Glsi01g0100 168 Gene3D DnaJ domain 46 150 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0100 Glsi-ChrGlsi01 861587 862093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0100 63 126 C2H2 Transcription Factor Family AT1G74250 44.118 3.25e-10 55.8