Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0078 ATGGAGGACGGTGAGCTTGATTTCTCAAACCAGGAAGTGTTCTCGAGTCCAAACATGGGGGAACTTCCAAGCAGTTGCTCAATGGACAGTTTCTTTGATGATCTTTTTAACGACACGCATGCTTGCTCTCACACCCACACTTGCAACCCTCCTGGCCCTGACTATTCACATACCCACACTTGTTATCATGTGCACACGAAAATTGTGCCCGCTCCTTCTGAAGACAAGGCTGGCACTGATGATAGTGCAGACTCTGTGGAAAAGAAGTCAAAAAAACGCCCTCTAGGTAACCGTGAAGCAGTTCGCAAATACCGTGAGAAGAAGAAAGCCCGAGCTGCATCGTTGGAGGATGAAGTTTTGAAATTGAGAGCTTTGAATCAACATTTGTTGAAGAGGTTGCAAGGTCAGTCTGCTTTAGAGGCTGAAATTGCAAGGCTAAAGTGCTTGCTTGTGGACATTCGAGGAAGGATTGATGGGGAGATTGGATCGTTTCCATATCAGAAATCAGTTAATTCAAACCTGCCAACCCCAAACTTGCCTGGTTCTTATGTGGTGAATCCTTGTAACGTGCAGTGTGGTGATCAGGTCTATTGCCTTCGTCCAGGAGCAGACGGTAAGAATACTGAAGGTGCACCAAATAATGGGCAAGAATTTAATGGTTGTGAATTTGAGAGCCTCCAGTGCCCTGCAAACCAGAATTTGGGGATTAAAGATATTCCTGATTGTGGAGTTGGACAGATAGTTTCTAATGTCAACTCTTCTACACCAAATAAAAGAAAAGGTGAAGCCTAA 792 0.447 MEDGELDFSNQEVFSSPNMGELPSSCSMDSFFDDLFNDTHACSHTHTCNPPGPDYSHTHTCYHVHTKIVPAPSEDKAGTDDSADSVEKKSKKRPLGNREAVRKYREKKKARAASLEDEVLKLRALNQHLLKRLQGQSALEAEIARLKCLLVDIRGRIDGEIGSFPYQKSVNSNLPTPNLPGSYVVNPCNVQCGDQVYCLRPGADGKNTEGAPNNGQEFNGCEFESLQCPANQNLGIKDIPDCGVGQIVSNVNSSTPNKRKGEA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0078 263 MobiDBLite consensus disorder prediction 71 108 - -
Glsi01g0078 263 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Glsi01g0078 263 Coils Coil 98 132 - -
Glsi01g0078 263 MobiDBLite consensus disorder prediction 77 103 - -
Glsi01g0078 263 MobiDBLite consensus disorder prediction 1 20 - -
Glsi01g0078 263 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Glsi01g0078 263 Gene3D - 76 153 - -
Glsi01g0078 263 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Glsi01g0078 263 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 165 IPR031106 GO:0003700|GO:0006351
Glsi01g0078 263 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Glsi01g0078 263 CDD bZIP 91 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0078 Glsi-ChrGlsi01 686666 687457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0078 1 261 bZIP Transcription Factor Family AT4G35040 64.639 6.05e-114 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi01g0078 bZIP_2 8e-13 CL0018