Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0063 ATGAACTTTTTGAGGGCCTGCTTTCGGCCAAGTTCAGATAGCTATGTACGCACTGGTTCAGATGCTGGAGGTCGACGGGATGGACTCCTATGGTATAAAGACTTGGGGCAGCACTTGAGCGGTGAATTTTCAATGGCTGTGGTCCAAGCCAATAATTTGCTGGAGGATCAGAGCCAGGTTGAATCAGGCAGTTTAAGCTCCAGTGAATCCGGTCCTTATGGCACCTTTGTTGGTATCTATGATGGGCATGGAGGGCCTGAGACCTCGCGGTTTATTAATGATAACCTATTTCACCATCTCAAGAGGTTTGCTGCAGATCAACAATCAATGACAGCAGATGTAATTCGCAAGGCATTTCAGGCAACAGAAGAGGGATTTATGTCTCTTGTTGCCAGGCAGTGGCCAATGAAACCACAGATCGCTGCTGTTGGGTCATGCTGTCTTGTCGGTGTTATTTGTAATGGAACCCTTTATATAGCTAATCTTGGTGATTCTCGAGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGGGAGGTCCTAGCCATGCAACTGTCAACCGAGCACAACGTGTCAATAGAGTCTGTAAGACAGGAGCTGCATTCTTTGCACCCTGATGACTCACATATTGTTGTTTTAAAACATAACGTATGGCGTGTAAAGGGCCTTATACAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGGCTGAGTTCAATAGAGAGCCTCTATATGCTAAGTTTCGACTTCGTGAGCCATTCAAGAGACCTATACTGAGCTCTGAACCATCAATATCAGTGACCCAGTTGCAGCCACATGATCAATTTATTATATTTGCGTCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGAAGCTGTTGATATAGTTCAAAATAACCCCCGCAGTGGAAGTGCAAAGAGGCTGGTGAAAGCTGCTCTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACCTAAAGAAAATTGATCGCGGGGTTCGTCGACATTTCCATGATGATATAACCGTGATTGTTGTGTTTCTTGACTCAAATCTTGTGAGTAGGGCAAGCTCTGGCAAGTTTTCTAGTATATCTGTTAGAGGGGGTGGCATCAGCCTGCCTCCAAACACACTGGCACCCTGTACGACACCAACCGAAGCTGGTGGTACCTGA 1179 0.4529 MNFLRACFRPSSDSYVRTGSDAGGRRDGLLWYKDLGQHLSGEFSMAVVQANNLLEDQSQVESGSLSSSESGPYGTFVGIYDGHGGPETSRFINDNLFHHLKRFAADQQSMTADVIRKAFQATEEGFMSLVARQWPMKPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRVVKATGEVLAMQLSTEHNVSIESVRQELHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVTQLQPHDQFIIFASDGLWEHLSNQEAVDIVQNNPRSGSAKRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSGKFSSISVRGGGISLPPNTLAPCTTPTEAGGT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0063 392 ProSiteProfiles PPM-type phosphatase domain profile. 39 350 IPR001932 -
Glsi01g0063 392 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Glsi01g0063 392 Pfam Protein phosphatase 2C 69 320 IPR001932 -
Glsi01g0063 392 CDD PP2Cc 43 350 IPR001932 -
Glsi01g0063 392 SMART PP2C_4 36 348 IPR001932 -
Glsi01g0063 392 FunFam Phosphatase 2C family protein 31 360 - -
Glsi01g0063 392 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Glsi01g0063 392 Gene3D - 33 360 IPR036457 -
Glsi01g0063 392 PANTHER PROTEIN PHOSPHATASE 40 348 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0063 Glsi-ChrGlsi01 597320 600644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0063 1 391 PP2C-type Phosphatase Gene Family AT4G38520 74.936 0.0 632