Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0021 ATGGATGGCTTAAAGGAAAACCAACTGGGTCCGCTGATACCCTCCTCAAATCTTCAAGGCGGTTCAAGAATGGAGGGCGTCAAGCTTGTCAAGGAGATGGCACAGAACCATCGCCGGGCTCTGAGCAATATCAATCAGAATATTATGGTGGCTAGTCATAAGCCTAGTGTGGTCAATTTAAGAAATCTTTCCGGGAGAAGTACAGAACATACGGTTCAGCACTGCCCTGAAGACGCCAAAAAACTGAGCATGTTAGCCTCGAACCCGAGTTATCAGTTGGATTGTACAATAATAGATATTGACGAATATGAGGATGCTAGTGACAATGCAGTTCCTGAGTTTGTGAAGCACACCGAAGCAATGTTAGAGGAAATTGACAGATTAGACGAAGTCGAAATGGAAGACGTGGAGGAACCTATTATAGACATCGACGCCTGTGATAGGAAGGATCCACTTTCAGTTGTCGAGTACATTGATGACATCTACGAATATTATAAAAAATCTGAGAATTCTACCTGCGTTTCTCCAGATTACATGACATGTCAGTTTGACATCAATGAAAAGATGAGGGCTATCCTCATTGACTGGCTCATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAGACATTGTTCCTTACTGTCAGTCTTATAGACAGGTTCTTAGAGCGTCAGACGGTGATCAGAAAGAAGCTTCAGTTGGTAGGTGTAACAGCCATGCTAATAGCTTGCAAATATGAGGAGGTTTCTGTCCCCACTGTTGAGGACTTTGTCCTAATAACAGATAAGGCATACAAAAGGGAAGAAGTTCTAAAAATGGAGAAATTAATGGTGAACACTTTACAATTCAACTTGTCCGTGCCTACCCCATATGTGTTCATGAGGAGATTTCTCAAGGCTGCTGAACCTGACAAAAAACTGGAGCTCTTGTCCTTCTTCATGATCGAGCTTTGCTTGGTGGAATACAAAATGCTCAACTTTTCACCATCTTTGCTAGCTGCTGCAGCTATTTACTCAGCTCAATGTAGTCTGTACCAGTTTAAGCAATGGACAAAGACCTGCGAGTGGTATACTAATTACTCAGAAGACCAGCTTCTAGAGTGCTCCAGACTGATGGTTGCTTTCCATCAAAAGGCTGGAACTGGAAAACTCACCGGAGTATATAGGAAGTATAGTACATGGAAGTATGGCTATGCGGCAAAAATGGAACCAGCCCAGTTTCTACTGGACCAGGGATTAATGAACGCATATTGA 1254 0.4274 MDGLKENQLGPLIPSSNLQGGSRMEGVKLVKEMAQNHRRALSNINQNIMVASHKPSVVNLRNLSGRSTEHTVQHCPEDAKKLSMLASNPSYQLDCTIIDIDEYEDASDNAVPEFVKHTEAMLEEIDRLDEVEMEDVEEPIIDIDACDRKDPLSVVEYIDDIYEYYKKSENSTCVSPDYMTCQFDINEKMRAILIDWLIEVHYKFELMEETLFLTVSLIDRFLERQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFVLITDKAYKREEVLKMEKLMVNTLQFNLSVPTPYVFMRRFLKAAEPDKKLELLSFFMIELCLVEYKMLNFSPSLLAAAAIYSAQCSLYQFKQWTKTCEWYTNYSEDQLLECSRLMVAFHQKAGTGKLTGVYRKYSTWKYGYAAKMEPAQFLLDQGLMNAY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0021 417 FunFam G2/mitotic-specific cyclin-1 263 400 - -
Glsi01g0021 417 SMART Cyclin_C_2 288 405 IPR004367 -
Glsi01g0021 417 SUPERFAMILY Cyclin-like 287 406 IPR036915 -
Glsi01g0021 417 SUPERFAMILY Cyclin-like 149 285 IPR036915 -
Glsi01g0021 417 MobiDBLite consensus disorder prediction 1 21 - -
Glsi01g0021 417 Pfam Cyclin, C-terminal domain 288 404 IPR004367 -
Glsi01g0021 417 Pfam Cyclin, N-terminal domain 160 286 IPR006671 -
Glsi01g0021 417 PIRSF Cyclin_A_B_D_E 20 417 IPR046965 GO:0016538|GO:0044772
Glsi01g0021 417 CDD CYCLIN_AtCycB-like_rpt2 288 404 - -
Glsi01g0021 417 Gene3D - 174 286 - -
Glsi01g0021 417 PANTHER CYCLINS 118 393 IPR039361 -
Glsi01g0021 417 ProSitePatterns Cyclins signature. 190 221 IPR006671 -
Glsi01g0021 417 CDD CYCLIN_AtCycB-like_rpt1 139 283 - -
Glsi01g0021 417 Gene3D - 160 400 - -
Glsi01g0021 417 SMART cyclin_7 195 279 IPR013763 -
Glsi01g0021 417 SMART cyclin_7 292 374 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0021 Glsi-ChrGlsi01 338492 340923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0021 6 409 Core Cell Cycle Gene Families AT1G20610 58.216 1.48e-169 480