Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0010 ATGACGGTGGCGCAATGGCAGGAGCTCGAACACCAAGCTCTCATCTTTAAGTATCTCAAGGCTGGATTGACTGTAACCCCAGACCTCCTCACCCTTATTCACAAGTCTCCAATCGATGTCGGCAAAGGTCGTCCATCACCCAGCTTTGGGTTGTTGCTCCTATCACGGGAAGAAGATAATCCCAAGGCCAGGAAGGTGCCGAAGAACGGATGGGAAGAAGCGGAGACGTTGCTACTGGGAGCAGAAGTTGGCTGTGGAAGCTTCCAGAGCCTGCCCTTGCACACAAATGGCACTCGTGAGGGTTTGAACCTTGGAAACAACGTATCACGGCTGCAGATAGTCTCTTCCTAG 351 0.5242 MTVAQWQELEHQALIFKYLKAGLTVTPDLLTLIHKSPIDVGKGRPSPSFGLLLLSREEDNPKARKVPKNGWEEAETLLLGAEVGCGSFQSLPLHTNGTREGLNLGNNVSRLQIVSS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0010 116 PANTHER GROWTH-REGULATING FACTOR 5 2 45 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi01g0010 116 SMART QLQ_2 1 35 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi01g0010 116 ProSiteProfiles QLQ domain profile. 1 35 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi01g0010 116 Pfam QLQ 2 33 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0010 Glsi-ChrGlsi01 128523 129135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0010 2 36 GRF Transcription Factor Family AT3G13960 54.286 3.44e-07 45.4