Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi999g00007 ATGGAGTGCACCTCTAATAAGCATTATTCTGTTCTTTTGATTTTACTCATATTCCTTAGTCCTCTAGTATGCTGTCAACTTAGTTATGATTTCTATGAAGTAACTTGTCCACTCCTCACTCCTATTGTTCAAACCTCTCTCAAGTTTGCTATGGCCAATGAACCAAGGATTGCAGCTTCTCTCCTGCGCCTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGGATCTGTGCTACTTGATGATACCAGCACCTTTAAGGGGGAGAAAAATGCAAAGCCTAATCGAAATTCAATAAGAGGATTTGAGTTCATTGACATAATTAAGTCTAAATTAGAGTTTGTCTGTCCATCCACCGTGTCATGTGCTGATTTACTAGCTATAACAGCAAGAGAAGCTGTTAATCTTAGTTTATTACCATTCCCATATTGGAGGCCTACACTCCTTGGTCGTAGAGATGGCACAACAGCAAGCGAAAGTGAGGCTAATAAGCTTCCTTCACCCTTTGACACCCTTCAAAACATTACCTCCAAGTTCATTTCCAAGGGTCTTGAAGTTAAGGATGTGGTAGTGCTCTCAGGAGCCCACACTATTGGGTTTGCCCAATGCTTTACATTCAAGCAAAGGCTCTTCAACTTTAATAGCACTGGTAAACCCGATCCATCACTTGATTCTTCACTTCTACAATATTTACAGAAACTATGCCCAGATAATTATCATGATACCAATCTGGCTCCTTTGGATTCCTTCACTTCCTACATATTTGATAACATGTATTACAGAAACCTTGTGAAGAATTCAGGGCTACTGCAGACAGATCAGGCTCTTATGCATGATGCCATGACTGCTTCATTGGTCATTAATTATAGTGAATACCCTGGTCAGTTTTACCAGGACTTTGCAGCATCTCTTGAGAAGATGAGCCTTATAGGTGTACTTACAGGACAACAAGGGGAGATAAGGAAAAACTGTAGGGTGGTGAACTAG 987 0.4043 MECTSNKHYSVLLILLIFLSPLVCCQLSYDFYEVTCPLLTPIVQTSLKFAMANEPRIAASLLRLHFHDCFVNGCDGSVLLDDTSTFKGEKNAKPNRNSIRGFEFIDIIKSKLEFVCPSTVSCADLLAITAREAVNLSLLPFPYWRPTLLGRRDGTTASESEANKLPSPFDTLQNITSKFISKGLEVKDVVVLSGAHTIGFAQCFTFKQRLFNFNSTGKPDPSLDSSLLQYLQKLCPDNYHDTNLAPLDSFTSYIFDNMYYRNLVKNSGLLQTDQALMHDAMTASLVINYSEYPGQFYQDFAASLEKMSLIGVLTGQQGEIRKNCRVVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi999g00007 328 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gabi999g00007 328 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 FunFam Peroxidase 166 307 - -
Gabi999g00007 328 Gene3D - 30 328 - -
Gabi999g00007 328 PANTHER PEROXIDASE 72-RELATED 24 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Gabi999g00007 328 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 Pfam Peroxidase 43 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 Gene3D Peroxidase, domain 2 166 307 - -
Gabi999g00007 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gabi999g00007 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi999g00007 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi999g00007 Gabi-Chr999 139436 141075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi999g00007 26 324 Peroxidase AT1G49570 59.076 1.10e-120 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi999g00007 K00430 - gmx:100789642 486.108