Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi999g00005 ATGCGTTGGTTACCCACCCTTTCCTTCTCCCCTTCTCATTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCGCCACCGTCGACCACCGCAGGAAGGTCTGGCTCTTCGGGAACTCCTCCGACAAGAAGCGCACCCGCCACGTCGGCGATCACGATGCCAGGGGACACTTCTCCGACGAAGACGCCCTCGTCCCTTCCCCCCATTCCTCCGTCGAGCCTCACCCCTTGCCCTTGCCGGAATTCTCCTCCGCCGCCTTGCTCCGCCACAGAGATGGTGATTCCCGTCTGCCCTCGCCTACCGGCTTTCGTATGCGGAGTGTTTTTGCAAGCCCAGATACAAGAAAGAATATGGAGCAGGCTGAAACTAGGTCATCAAGGTTGGTGCATCAAGATCTTGGTGGTTCTGAGAATACTCGAGATTGCGTCCAGGTTAGGAGTGCTTCGAGTAGTCCGTTTGCCAGTCCTTCAATCAGTCCACAGAGAAAGAGAAATGGTGATTTTGTGCCATATTATTATGTGACTCCCGGAGGAAAACAATGCTGGTCTGCACCAGAGATGTCAACCTCTGAAGCCGGGTTACCACCTCCTGCATTCTTTGATTTATCAACATTAGGCACTAATGCTTCTCCACCTCCCCATCAAAGTCCACAGGTAAGAGGTCCCCAGGGACACCTTAGGAGCTCAAGTGGACCTCCATCAACCATACATACCTTGCTATCCCTTGAGATCTCAACCGCACGTCGCGAAAGTAATGCTCCTGTCAGTGTTCACCCCTTACCCTTGCCTCCTGGGGCAGCCTTGCCTTCACCATCTGCTGCGGCTACTCTTTCCCATGCTGTGGCATTGCCAATGAAAAGCCAGTGGAAAAAAGGGAAACTTATTGGGCGCGGCACATTTGGAAGTGTTTATGTTGCCACCAATAGAGAAACTGGAGCATTATGTGCAATGAAGGAAGTGGAATTATATCCTGATGATCCAAAATCTGCAGAGTGTATGAAGCAGTTACAGCAGGAAATCAAAGTTTTTAGCCATCTAAAACATACAAACATCGTGCAGTATTATGGCTGTGAAATAGTTGAAGACCGGTTTTATATTTATCTGGAATACGTTCATCCCGGTTCAATTAATAAATATGTCCATGAGCATTGTGGAGCCATAACAGAATCTGTCATTCGGAATTTCACTCGCCATATTCTTTCGGGGTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCCAATTTGCTTGTCGATTCTGCTGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATCTAACTGGATATGAAGCTAATCTTTCTTTGAAGGGAAGTCCGTACTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATGCAAAAGGATAACAGCTCTGATCTAGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACAATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGCGAGTATGAAGGAGCTGCAGCTATGTTCAAGGTTATGAGAGATACCCCTCCTATACCTGAAACATTGTCATCTGAGGGTAAAGATTTCCTGAGGTGCTGCTTTAAAAGAAATCCGGCAGAGCGACCGTCTGCTGCAGTGTTACTAGAACATCGATTTTTGAAAAACTCACAACAACCAGATGTTTTATCTCCCACTCAGCAGTACAATGGAACAAGTTTCATGGATAAACCCCATAGTCCCAGAGGGCAATCTGAAAATAAATCTGATCAGATGTTTATCCCCAGTGCAAAGATAGCAAACGGGAAAGCCGCTGTGAGGCGAGGATTTCTCGTTCCTTCTTTAGATATTCTCCCTGAATATTGGGACCAATGA 1857 0.4717 MRWLPTLSFSPSHSSSSSSSSSSATVDHRRKVWLFGNSSDKKRTRHVGDHDARGHFSDEDALVPSPHSSVEPHPLPLPEFSSAALLRHRDGDSRLPSPTGFRMRSVFASPDTRKNMEQAETRSSRLVHQDLGGSENTRDCVQVRSASSSPFASPSISPQRKRNGDFVPYYYVTPGGKQCWSAPEMSTSEAGLPPPAFFDLSTLGTNASPPPHQSPQVRGPQGHLRSSSGPPSTIHTLLSLEISTARRESNAPVSVHPLPLPPGAALPSPSAAATLSHAVALPMKSQWKKGKLIGRGTFGSVYVATNRETGALCAMKEVELYPDDPKSAECMKQLQQEIKVFSHLKHTNIVQYYGCEIVEDRFYIYLEYVHPGSINKYVHEHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGYEANLSLKGSPYWMAPELLQAVMQKDNSSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDTPPIPETLSSEGKDFLRCCFKRNPAERPSAAVLLEHRFLKNSQQPDVLSPTQQYNGTSFMDKPHSPRGQSENKSDQMFIPSAKIANGKAAVRRGFLVPSLDILPEYWDQ 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi999g00005 618 MobiDBLite consensus disorder prediction 554 584 - -
Gabi999g00005 618 ProSiteProfiles Protein kinase domain profile. 287 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi999g00005 618 ProSitePatterns Protein kinases ATP-binding region signature. 293 316 IPR017441 GO:0005524
Gabi999g00005 618 MobiDBLite consensus disorder prediction 33 60 - -
Gabi999g00005 618 MobiDBLite consensus disorder prediction 219 233 - -
Gabi999g00005 618 MobiDBLite consensus disorder prediction 7 27 - -
Gabi999g00005 618 SMART serkin_6 287 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi999g00005 618 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 12 561 - -
Gabi999g00005 618 Pfam Protein kinase domain 288 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi999g00005 618 FunFam Mitogen-activated protein kinase kinase kinase 5 284 585 - -
Gabi999g00005 618 MobiDBLite consensus disorder prediction 200 233 - -
Gabi999g00005 618 Gene3D Transferase(Phosphotransferase) domain 1 283 586 - -
Gabi999g00005 618 SUPERFAMILY Protein kinase-like (PK-like) 280 581 IPR011009 -
Gabi999g00005 618 MobiDBLite consensus disorder prediction 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi999g00005 Gabi-Chr999 109306 114366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi999g00005 141 592 MAP Kinase Kinase Kinase AT5G66850 63.674 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi999g00005 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi999g00005 - - gmx:100790701 897.116