Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi994g00007 GTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCCGAGACATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGAATTACGACATGATCAGGGAGCTTCTTAATATACAGTCTTTAAATCAACGTGTTTTCATCACTCATGCAAGGTCTGATGATAATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTTAATGCTGAACATGGATTCGACTCCGGGGAATTTCCATGCACCTGCTGGGAATATGGGGTATTTCCATGAGGGGATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGCTGAATGGGTTGAGCAGGATGATCATGGAGTGTCAATCACTGTGAAGAGGTCAGCTAATGGGACCAAGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGCTGCAGCCAAGGATTGGTGGCTGCGCAACAGGGTTCGAGTCATGCTCAGTATATGTGAATCCTTGTTACTGTGA 516 0.4651 VSLPTGGNDLKRIRFCRDMFDKSRAQRWWAENYDMIRELLNIQSLNQRVFITHARSDDNENSGESEQDIPMALMLNMDSTPGNFHAPAGNMGYFHEGISRANNPTDNDMDAEWVEQDDHGVSITVKRSANGTKQIRRIKFSREIFDAAAAKDWWLRNRVRVMLSICESLLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi994g00007 171 Pfam Transcription factor regulating root and shoot growth via Pin3 111 162 IPR013591 -
Gabi994g00007 171 Pfam Transcription factor regulating root and shoot growth via Pin3 2 37 IPR013591 -
Gabi994g00007 171 ProSiteProfiles BRX domain profile. 111 166 IPR013591 -
Gabi994g00007 171 ProSiteProfiles BRX domain profile. 1 41 IPR013591 -
Gabi994g00007 171 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 161 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi994g00007 Gabi-Chr994 195051 196116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi994g00007 1 162 Major Intrinsic Protein MIP AT1G31880 42.246 1.97e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi994g00007 - - rvl:131306637 155.606