Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi988g00010 ATGGCAGTTACATTATACAACCCTAGCTCTGCATCTGGGTTGAAGAAGCTTGATGAGTACCTTCTCTCACGCAGTTATATCACTGGGTACCAAGCTTCAAAGGATGATGTTACTGTCTATGCTGCTTTGTCATCTGTTCCATCAGATGAATATGTGAATGTGTCGAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGTGAGGGATGTGGTGTCACTGTGGGGGGATCTTCTCTTGTAGCTGATGAGACTGTTGCCACTCCCCCACCTGCCGACTCAAAGGCTACTGCAACTGCAGATGAGGATGATGATGATGATGTGGATTTGTTTGGTGAAGAGACCGAGGAAGAAAAGAAGGCAGCTGAGCAACGGGCAGCTGCTATGAAAGCATCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGCTGGATGTAAAGCCGTGGGATGATGAAACCGACATGAAAAAGCTTGAAGAAGCAGTCAGATCTGTTCAGATGGAAGGATTGCTTTGGGGTGCATCCAAACTTGTTGCTGTTGGGTACGGTATCAAGAAACTGCAAATTATGCTTTCTATTGTGGATGACCTAGTCTCTGTCGACACTCTCATTGAGGAACGTCTTACAGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATTGTAGCCTTTAATAAAATATAA 702 0.4444 MAVTLYNPSSASGLKKLDEYLLSRSYITGYQASKDDVTVYAALSSVPSDEYVNVSRWYKHIDALLRISGVSGEGCGVTVGGSSLVADETVATPPPADSKATATADEDDDDDVDLFGEETEEEKKAAEQRAAAMKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVAVGYGIKKLQIMLSIVDDLVSVDTLIEERLTVEPINEYVQSCDIVAFNKI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi988g00010 233 SMART EF1_GNE_2 144 233 IPR014038 GO:0003746|GO:0006414
Gabi988g00010 233 MobiDBLite consensus disorder prediction 87 112 - -
Gabi988g00010 233 FunFam Elongation factor 1-delta 1 3 78 - -
Gabi988g00010 233 CDD EF1B 142 233 IPR014038 GO:0003746|GO:0006414
Gabi988g00010 233 Pfam EF-1 guanine nucleotide exchange domain 146 233 IPR014038 GO:0003746|GO:0006414
Gabi988g00010 233 Coils Coil 116 136 - -
Gabi988g00010 233 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 233 - -
Gabi988g00010 233 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 108 116 IPR001326 GO:0003746|GO:0005853|GO:0006414
Gabi988g00010 233 Gene3D - 137 233 IPR014717 -
Gabi988g00010 233 FunFam Elongation factor 1-beta 1 like 138 233 - -
Gabi988g00010 233 SUPERFAMILY eEF-1beta-like 141 233 IPR036219 -
Gabi988g00010 233 SUPERFAMILY GST C-terminal domain-like 11 67 IPR036282 -
Gabi988g00010 233 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 222 233 IPR001326 GO:0003746|GO:0005853|GO:0006414
Gabi988g00010 233 Gene3D - 2 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi988g00010 Gabi-Chr988 178458 180596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi988g00010 7 233 Eukaryotic Initiation Factors Gene Family AT2G18110 80.617 2.59e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi988g00010 K03232 - rvl:131311279 338.961