LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi987g00009	ATGGATATGGACTTTGTCAATTATTCTCCCATAAATACGGACACTAATATTAGTTCGAACAACGGAGTGAGAACAGATTTCAACTTTCAAGACGTGCCACATTGTTCTAATGTTGAAGAAGTAATTGTTGAGCCTCATGTTGGAATGGAATTTGACTCATTGGAAAAAGTTGAAGAATTATATAAAATATTTGCTAAGGCAAAAGGGTTTGGAATTCGTACCCGCGATAGTAAAAAGAATTATTGTAGATTTGTATGTGTTAGGGAAGGTGAAAACAAACCAAAAAGTGGTAACATGGGAGAAGTTAAGAGAACGTCTTCAACCCAACGCTTGGGATGTCAATCATCACTTTGTGTGTCAAAGGATAAGAAACGAGACATATGGGTTGTAAAATCTTTTGACAATAATCACAATCATATCATGGCTAGTCCTAAGAGTGTGTCTTATTTGAGGTGTCATAGGAAAATGAATGGTGCTGCAAAAAATCTTGTTGAAAAGTTTAATGCAGAAGGTTTACCTACTGCTAAGGTTGCTGCAATCTTTAACGGTAGTGATTTATCTTTTTCTAACCGGGACTGTTGGAATCATTTGAGGAATGTTCGAAGGAAGAATTTGGATGTTGGAGATGCACAAGCTGTTTTGAACTATTGTAAACAAAAACAAGCTCAGAATTCTAATTTTTTTTATGCAATACAATGTGATGATGATGATAGAATGATAAACTTTTGTTGGTTGGATGCTAGGTCAAGGGCTGCTTATCAATATTTTGGAGATGTTATTACTTTTGATACAACATATAGAACCAATAAATATAGTATGCCATTTGCCCCATTTACGGGATTGAACCATCATTTGCAGTCAATTTTATTTGGTTGTGCATTATTACAAGATGAATTTGAGAAATCTTTTGTATGGTTATTTGAAACTTGGCTTGAGGCAATGAATGGAAAGAAGCCTATTGGATTCTAA	969	0.3457	MDMDFVNYSPINTDTNISSNNGVRTDFNFQDVPHCSNVEEVIVEPHVGMEFDSLEKVEELYKIFAKAKGFGIRTRDSKKNYCRFVCVREGENKPKSGNMGEVKRTSSTQRLGCQSSLCVSKDKKRDIWVVKSFDNNHNHIMASPKSVSYLRCHRKMNGAAKNLVEKFNAEGLPTAKVAAIFNGSDLSFSNRDCWNHLRNVRRKNLDVGDAQAVLNYCKQKQAQNSNFFYAIQCDDDDRMINFCWLDARSRAAYQYFGDVITFDTTYRTNKYSMPFAPFTGLNHHLQSILFGCALLQDEFEKSFVWLFETWLEAMNGKKPIGF	322

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi987g00009	322	PANTHER	OS01G0519700 PROTEIN	37	319	-	-
	Gabi987g00009	322	Pfam	FAR1 DNA-binding domain	60	141	IPR004330	-
	Gabi987g00009	322	Pfam	MULE transposase domain	259	319	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi987g00009	Gabi-Chr987	97091	98627	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Gabi987g00009		FAR1	4.6e-13	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi987g00009	-		-	vvo:131633311	460.685