Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi983g00001 ATGGTATTTCAAGTTGGTGGCAAAGACGGTTGGGTGGTCAAACCTTTGGAAGAATATAATCACTGGGCTCGAAGACACGTGTTTCATGTCAATGACATTCTATATTTTAAATATAAGGAAGGGAATGATTCAGTTTTGGTTGTGAAGAAGGAGGATTACTATTCGTGTAACATCACTAACCCCATTCATAAGATGGACGATGGAAATTCAACTTTCCATTTGAATAAACTAAGTCTCTTTTTCTTCATTAGTGACAACGTTAACAACTGCAAAAATGGACAAAGGCTAATCATCACCGTCATGTCCGCTTCTCCGGCACCATCTCCATCCAAAGTTTCGGACTCACCAAGGCTACTTCAAGGTTAA 366 0.3934 MVFQVGGKDGWVVKPLEEYNHWARRHVFHVNDILYFKYKEGNDSVLVVKKEDYYSCNITNPIHKMDDGNSTFHLNKLSLFFFISDNVNNCKNGQRLIITVMSASPAPSPSKVSDSPRLLQG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi983g00001 121 Pfam Plastocyanin-like domain 14 94 IPR003245 GO:0009055
Gabi983g00001 121 Gene3D - 1 106 IPR008972 -
Gabi983g00001 121 PANTHER BLUE COPPER PROTEIN 3 103 IPR039391 GO:0009055
Gabi983g00001 121 CDD OsENODL1_like 2 101 IPR041846 -
Gabi983g00001 121 FunFam Early nodulin-like protein 1 1 105 - -
Gabi983g00001 121 ProSiteProfiles Phytocyanin domain profile. 1 102 IPR003245 GO:0009055
Gabi983g00001 121 SUPERFAMILY Cupredoxins 2 101 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi983g00001 Gabi-Chr983 58498 58981 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi983g00001 3 103 Phytocyanin Superfamily AT4G32490 51.485 7.85e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi983g00001 - - gmx:100803858 151.369