Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi982g00004 ATGTCAATTGCGTGCGTTCTACGTGACTTGCTTCATGCAATTGATTACCTACATAATGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGAGACTGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACTAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAAAACACAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGTATTACTGCAATTGAAATGGCAAAAGGGGAGCCACCACTTGCTGATCTTCATCCTATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCGCCGCAGCTAGATGAGCATTTTTCTCGTCCCATGAAAGAATTTGTTTCATTGTGTTTGAAGAAGGTTCCTGCCGAGAGGCCAAGTGCTAAGGAACTTCTCAAACACCGTTTCATTCGGAGTGCTAGGAAGAATCCAAAGCTTTTAGAGAGAATAAGGGAGCGACCAAAGTATCAAATAAAGGAAGATCCGGTGGAACCTAGAAATGGCCCGGGTGGAATAGGGGAGGCATCTGATACTATCAAGGTGGCAAGAGATTTAAGAAGTGAAGAAACTAATCAGCCCAGTGGTCAGGGTAAAACCCTGAAAAGTTCTGGGTGGGACTTCAGCATTGGGGGATCACAGGGTACTGGAACCTTTCGTAGTGTTTCACGACCACCTCAGTTTAGAGATAAGAAAGCTGAAGTTTCAAATCATCAGCTTAACCAAAGGAAAACTTCAGATAGTGGCTATCAAGAGGGATCTGCCATTAGAAGTGCCCTTAATGAGTCGCTAGAAACTTCTTTTAGAAAAGATCTCGGAGTTTCCTACCATGATGAGAATCCAGATAATCACCTTGAAGATGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTGTTAGGCCTCTCAAAGGATCACAGCCATCACTGTTTCGTGACCAAAGTTCTCTGTCTAGCAGCAGCTATGCTTCTTTTGAAGATTCTTCTACCAGTGGAACTGTTGTTTTGCGTAGTCAGCATGATGATTCTGATTCTCCACAGACACCAAGGTCCCGACTGGGACTTAATAGCAGAAATTCAAATGCCTCACTGGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCAGCTATCCAAGGAGGATTAAAGAAAGTGAATGCTCGAGAGAGATTTGCACTTGGAAAACTCAACAATGATGTACAGGAAAGCAGGAGAGATGAAATGTCAAGCAGCTCTGATTCTTCCAGACCATCTCGTGAATACATTGATTCACAGAAAGGACTTTCAAGGTCTCATTATGCTAGTGATGATGAAGAAAGTTCCAAAATAATGTCATCCTCTCTGCCGTTATCTGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGTCGGTCGTGCAATTTGTTATCAACTCACTTGTAAACATGGAGAGGACAAAGCCTAGATCCTGTGATGCCTTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAGTCTTCATTGAAGGATCTGCAAGAACTGGCAGGCCAAATTTTCAGCAAAACCAATTCAACTGAAGAAACCCGAAATGCAGAGCCTGATAACAGGAAGAAACAACAGAACAAGGAAGTTCATTCAAATAGCAATTTAAGCCCACTTGCAAGATTTCTTCTTTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAATCCAGCTTGA 1776 0.4234 MSIACVLRDLLHAIDYLHNEGKIHRDIKAANILLTETGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLKHRFIRSARKNPKLLERIRERPKYQIKEDPVEPRNGPGGIGEASDTIKVARDLRSEETNQPSGQGKTLKSSGWDFSIGGSQGTGTFRSVSRPPQFRDKKAEVSNHQLNQRKTSDSGYQEGSAIRSALNESLETSFRKDLGVSYHDENPDNHLEDDELSGNGSGTVVVRPLKGSQPSLFRDQSSLSSSSYASFEDSSTSGTVVLRSQHDDSDSPQTPRSRLGLNSRNSNASLEDSATNLAEAKAAIQGGLKKVNARERFALGKLNNDVQESRRDEMSSSSDSSRPSREYIDSQKGLSRSHYASDDEESSKIMSSSLPLSVLLIPSLKEAIADDPEGSVVQFVINSLVNMERTKPRSCDAFVKKLLQRLASSKESSLKDLQELAGQIFSKTNSTEETRNAEPDNRKKQQNKEVHSNSNLSPLARFLLSRWQGQTSRDLNPA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi982g00004 591 MobiDBLite consensus disorder prediction 207 273 - -
Gabi982g00004 591 Pfam Protein kinase domain 6 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi982g00004 591 MobiDBLite consensus disorder prediction 415 461 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 170 195 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 546 562 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 327 385 - -
Gabi982g00004 591 FunFam Serine/threonine-protein kinase PAK 6 1 177 - -
Gabi982g00004 591 SUPERFAMILY Protein kinase-like (PK-like) 3 158 IPR011009 -
Gabi982g00004 591 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 2 540 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 292 385 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 418 458 - -
Gabi982g00004 591 SMART serkin_6 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi982g00004 591 MobiDBLite consensus disorder prediction 292 308 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 258 273 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 208 242 - -
Gabi982g00004 591 Gene3D Transferase(Phosphotransferase) domain 1 1 186 - -
Gabi982g00004 591 MobiDBLite consensus disorder prediction 538 570 - -
Gabi982g00004 591 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi982g00004 Gabi-Chr982 105524 132551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi982g00004 2 588 MAP Kinase Kinase Kinase Kinase AT3G15220 62.139 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Gabi982g00004 Pkinase 9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi982g00004 K08838 - gmx:100786501 981.089