Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi980g00015 ATGAAGCAGAAGAAGAACAAGATGCAGCTGAAAACTCAGTTCTTCTTCTTCTTATTCTTCAGTTATATTTCCTGTTTCTCTTGTGGTTTTGATGCTGCAACGAATGATGAAGCATCTGTTTTACTTTCTATACAATCAGGTCTCATTGATCCGTTGAATAAGCTACATGATTGGAAATTGTTGGACAAAGCACCAGGGAAGGATGCAGTTCATTGCAACTGGACTGGTGTCAAGTGCAATTCAGCTGGAGCTGTAGAGAAGCTTGATCTCTCCCACATGAATCTGAGTGGAAGTGTATCCAATGAGATACAAAGGCTAAAAAGTCTCACTTCTCTCAACTTGTGCTGCAATGGATTTTCTTCATCATTGTCAAAATCCATAGCCAATCTCACCACACTGAAGAGTCTTGATGTGAGCCAGAATTTCTTCATTGGTGATTTTCCATTAGGCCTTGGAAAGACATCAGGACTTGTGACCTTAAACGCATCCAGCAACAATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATGTCTCTTCCTTAGAGACACTGGATCTTAGAGGCAGCTTCTTTGAAGGGTCAGTTCCAAAATCCTTCAGTAACTTGAGCAAGTTGAAGTTCCTTGGTCTATCTGGGAATAATCTCACTGGGGAAATCCCAGGAGAACTAGGACAGCTTTCATCACTGGAGTGTATGATCATTGGGTACAATGAATTTGAAGGTGGGATTCCAGCAGAATTTGGAAATCTAACCAAGCTAAAGTATCTTGATTTAGCAGAAGGCAATCTTGGTGGTGAAATTCCAGCTGAGTTGGGAAAGCTCAAATTATTGAATACAGTTTTCTTATACATGAACAATTTTGAAGGCAAGATTCCACCGGCAATTGGAAACATGACTTCATTGGTGCTGCTGGATCTCTCAGACAACATGTTATCAGGAAATATTCCAGATGAAATAAGTCAGCTGAAGAATTTACAGCTTCTGAACTTCATGCGCAACCAGTTATCTGGTCCTGTGCCTTCTGGCCTTGGGGATTTGCCTCAACTAATGGTGCTTGAACTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCACTGCAGTGGTTGGATGTATCATCCAATTCACTTTCTGGTGAGATTCCTGAAACACTTTGCACCAAGGGCAATCTCACCAAGCTTATACTTTTCAATAATGCCTTCTTGGGTCCAATTCCAACAAGCCTATCAACATGTCCTTCACTTGTTCGTGTTAGAATTCAGAACAATTTTCTTTCTGGGACAATACCTGTTGGTCTTGGTAAGCTTGGGAAGCTTCAGAGATTAGAATTGGCTAACAATAGTCTTACTGGTGGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTTCCTTCCACCATTATTTCCATTCCAAATCTGCAAACTTTCATTGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGACCAATTCCAGGACAGTCCCTCACTTGGAGACCTTAACCTCTCATCAAATCGTTTCTCTGGAAGCATTCCAGCAAGCATAGCTTCATGTCAGAAATTGGTGAAATTGAGCCTACAGAACAACCAATTGACTGGTGAAATCCCAAGAGCAATAGCAAGCATGCCTACATTGGCCATTCTTGATCTTTCTAACAACTCTCTCACTGGTCAAATACCTGAAAGCTTTGGTATGTCTCCAGCTCTTGAAACATTCAATGTCTCATACAACAAACTAGATGGTCCTGTCCCAGTAAATGGTGTGTTAAGATCAGTAAACCCAAATGATCTTGTGGGCAATGCTGGCCTATGTGGTGGTGTCCTCCCTCCATGTGGCCAAGCATCTGCATATTCATTAAGGCATGGGAGGTCTCATGCAAAGAACATCATTGCAGGATTGATCATTGGAATATTATCAATCTTAGCCATTGGGGTTGCTGCTTTGGTGGCAAGATCTTTATACACAAGGTGGTACACTGATGGATTGTGCTTCCGAGAAAGATTTTATAGGGGTAGAAAGGGATGGCCCTGGAGATTGATGGCGTTTCAGAGGCTTGATTTCGCAAGTACTGACATTTTATCTTGCATCAAGGAAACAAATGTGATTGGGATGGGTGCAACTGGGGTTGTTTATAAGGCTGAGATACCACAATCAAGTACAGTTGTGGCAGTAAAAAAATTGTGGAGATCAGGATCTGATATTGAAGTAGGAAACAGTGATGACCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTAAGACTACTAGGCTTTCTTTATAATGACACTGATGTGATGATAGTTTATGAATTTATGCACAATGGAAACCTCGGAGATGCCTTGCATGGTAAACAAGCAGTAAGATTGCTTGTAGATTGGGTTTCCCGGTATAACATAGCTCTGGGAATTGCACAAGGACTTGCTTATCTTCACCATGATTGTCATCCACCAGTTATCCATCGAGACATTAAGTCCAATAATATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGACTTTGGTTTAGCCAAGATGATGATCAGGAAGAATGAAACAGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCTGAATATGGATACTCCTTGAAGGTGGATGAAAAGATAGACATTTACAGTTATGGAGTAGTTCTGTTGGAGCTTCTCACAGGAAAGCGACCTTTAGATCCGGAGTTTGGAGAATCGATAGACATTGTAGGGTGGATTAGGAAGAAGATCGACAACAAATCTCCAGAAGAAGCATTAGACCCCAATGTAGGAAACTGCAAGCATGTTCAAGAAGAGATGCTTTTAGTTCTAAGAATAGCACTTCTTTGCACTGCCAAGCTCCCCAAGGACAGACCCTCCATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCTCGGAGAAAAAGTGGTAGGAACAATGAAACATTTGCAGCTTACAAGGAAATGCCAGTCATTAGCACATCACCAGTTAATGGCCTTCTGTAG 3078 0.4175 MKQKKNKMQLKTQFFFFLFFSYISCFSCGFDAATNDEASVLLSIQSGLIDPLNKLHDWKLLDKAPGKDAVHCNWTGVKCNSAGAVEKLDLSHMNLSGSVSNEIQRLKSLTSLNLCCNGFSSSLSKSIANLTTLKSLDVSQNFFIGDFPLGLGKTSGLVTLNASSNNFSGFLPEDLGNVSSLETLDLRGSFFEGSVPKSFSNLSKLKFLGLSGNNLTGEIPGELGQLSSLECMIIGYNEFEGGIPAEFGNLTKLKYLDLAEGNLGGEIPAELGKLKLLNTVFLYMNNFEGKIPPAIGNMTSLVLLDLSDNMLSGNIPDEISQLKNLQLLNFMRNQLSGPVPSGLGDLPQLMVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCTKGNLTKLILFNNAFLGPIPTSLSTCPSLVRVRIQNNFLSGTIPVGLGKLGKLQRLELANNSLTGGIPDDIASSTSLSFIDFSRNNLHSSLPSTIISIPNLQTFIVSNNNLEGEIPDQFQDSPSLGDLNLSSNRFSGSIPASIASCQKLVKLSLQNNQLTGEIPRAIASMPTLAILDLSNNSLTGQIPESFGMSPALETFNVSYNKLDGPVPVNGVLRSVNPNDLVGNAGLCGGVLPPCGQASAYSLRHGRSHAKNIIAGLIIGILSILAIGVAALVARSLYTRWYTDGLCFRERFYRGRKGWPWRLMAFQRLDFASTDILSCIKETNVIGMGATGVVYKAEIPQSSTVVAVKKLWRSGSDIEVGNSDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDVMIVYEFMHNGNLGDALHGKQAVRLLVDWVSRYNIALGIAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRPLDPEFGESIDIVGWIRKKIDNKSPEEALDPNVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSGRNNETFAAYKEMPVISTSPVNGLL 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi980g00015 1025 Gene3D Ribonuclease Inhibitor 371 635 IPR032675 -
Gabi980g00015 1025 SUPERFAMILY Protein kinase-like (PK-like) 711 991 IPR011009 -
Gabi980g00015 1025 Pfam Leucine Rich Repeat 180 202 IPR001611 GO:0005515
Gabi980g00015 1025 Gene3D Phosphorylase Kinase; domain 1 716 800 - -
Gabi980g00015 1025 FunFam MDIS1-interacting receptor like kinase 1 801 1009 - -
Gabi980g00015 1025 Pfam Leucine rich repeat N-terminal domain 35 80 IPR013210 -
Gabi980g00015 1025 Gene3D Transferase(Phosphotransferase) domain 1 801 1013 - -
Gabi980g00015 1025 FunFam MDIS1-interacting receptor like kinase 1 716 800 - -
Gabi980g00015 1025 Gene3D Ribonuclease Inhibitor 194 260 IPR032675 -
Gabi980g00015 1025 SUPERFAMILY RNI-like 85 360 - -
Gabi980g00015 1025 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 375 635 - -
Gabi980g00015 1025 SMART LRR_typ_2 106 129 IPR003591 -
Gabi980g00015 1025 SMART LRR_typ_2 250 274 IPR003591 -
Gabi980g00015 1025 SMART LRR_typ_2 490 513 IPR003591 -
Gabi980g00015 1025 SMART LRR_typ_2 202 226 IPR003591 -
Gabi980g00015 1025 SMART LRR_typ_2 298 322 IPR003591 -
Gabi980g00015 1025 SMART LRR_typ_2 442 466 IPR003591 -
Gabi980g00015 1025 SMART LRR_typ_2 562 585 IPR003591 -
Gabi980g00015 1025 SMART LRR_typ_2 346 370 IPR003591 -
Gabi980g00015 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Gabi980g00015 1025 ProSitePatterns Protein kinases ATP-binding region signature. 722 746 IPR017441 GO:0005524
Gabi980g00015 1025 SMART serkin_6 716 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi980g00015 1025 PANTHER UNNAMED PRODUCT 184 923 - -
Gabi980g00015 1025 Gene3D Ribonuclease Inhibitor 261 366 IPR032675 -
Gabi980g00015 1025 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 34 189 - -
Gabi980g00015 1025 ProSiteProfiles Protein kinase domain profile. 716 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi980g00015 1025 FunFam Leucine-rich repeat receptor protein kinase EMS1 291 374 - -
Gabi980g00015 1025 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 190 290 - -
Gabi980g00015 1025 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Gabi980g00015 1025 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Gabi980g00015 1025 SUPERFAMILY RNI-like 267 604 - -
Gabi980g00015 1025 Pfam Protein kinase domain 718 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi980g00015 Gabi-Chr980 116631 119929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi980g00015 8 1025 Receptor kinase-like Gene Family AT1G08590 60.580 0.0 1196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi980g00015 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi980g00015 - - gmx:100788430 1782.69