Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi976g00019 ATGGAACACGTCAAAGATCCATCAATTTACCGCAATCCAGTCATATTGCAGAGTGAGCAATTAAATGAGTATATACTGGAAACTGCTATTTACCCTCGAGAACCAAAGCCTCTCAAAGAGCTGAGGGATGCCACTCACAATCACCCTTGGGGCTTCATAGCTACGTTACCTGATGCGGGTCAACTAATCACCTTACTTCTGAAGCTGTTGAATCCCAAAAAGACAATAGAAGTGGGAGTGTTTACTGGGTACTCACTTCTCCTCACTGCTCTCAACATTCCTGATGATGGAAAGATTACAGCCATAGATATTGACAGAAAAGCTTATGAAGTTGGATTGCCAGTCATCAAAAAGGCTGGTGTAGAGCACAAGATTGATTTCATAGAGTCCCCAGCTCTACCAATTCTTGATAAACTACTAGAAGATCCTGCAAACTTAGGAACTTATGAGTTCGCCTTCATTGATGCTGACAAAGAGAACTATGTGAACTACCATGAGAGGATTATAAAACTGGTCAAGGTTGGTGGGTTACTTATATATGACAATGTTCTCTGGGGTGGACGTGTTGCTTGGCCTGAAGAGGAAGTTCCACCACACAGCAGATCAGGGACGCAGGCAGTAATTGAATTTAACAAAAGAATCACAGAAGATTCTCGTGTTGAATTTGCTCTTACTTCCGTAGGGGATGGACTCAGTATTTGCAGGCGCATTGCCTGA 717 0.4282 MEHVKDPSIYRNPVILQSEQLNEYILETAIYPREPKPLKELRDATHNHPWGFIATLPDAGQLITLLLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAGVEHKIDFIESPALPILDKLLEDPANLGTYEFAFIDADKENYVNYHERIIKLVKVGGLLIYDNVLWGGRVAWPEEEVPPHSRSGTQAVIEFNKRITEDSRVEFALTSVGDGLSICRRIA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi976g00019 238 PANTHER O-METHYLTRANSFERASE-RELATED 12 237 - -
Gabi976g00019 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
Gabi976g00019 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Gabi976g00019 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Gabi976g00019 238 Pfam O-methyltransferase 34 237 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi976g00019 Gabi-Chr976 142051 144268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi976g00019 15 237 Monolignol Biosynthesis Gene Families AT4G26220 60.538 1.07e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi976g00019 K00588 - gmx:100800911 422.165