Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi976g00016 ATGGAAAACATTAAAGATCCATCAAGTTACCGCACTCCAGTCTTATTGCAGAGTGAGGAATTAATCAAGTATATACTGGAAACTGCTATTTACCCTCGAGAACCAAAGCCTCTCAAGGAGCTGAGGGATGCTACTCAGAATCATCCTTCATATTCATTCAGGAGCTTCATAGCTACTTCACCTGATGCGGGTCAACTAATCACCATACTTTTGAAGCTGTTGAATCCCAAAAAGACAATTGAAGTGGGAGTGTTTACTGGGTACTCACTTCTCCTCACTGCTCTCAACATTCCTGATGATGGAAAGATCACAGCCATAGATATTGACAGAAAAGCTTATGAAGTTGGATTACCAGTCATCAAAAAGGCTGCTGTAGAGCACAAGATTGATTTCATAGAGTCCCCAGCTCTACCAATTCTTGATAAACTACTAGAAGATCCTGCAAACGAAGGAACTTATGAGTTTGCCTACATTGATGCTGACAAAGAGAACTATGTGAACTACCATGAGAGGCTTATAAAACTGGTCAAGGTTGGTGGGTTACTTGTATATGACAATGTTCTCTGGGGTGGACGTGTTGCTTGGCCTGAAGAGGAAGTTCCACTACATGCCAGATCAGCGACGCAAGCAATTATTGAATTTAACAAAAGAATAACACAAGATTCTCGTGTTGAATTTGCTTTTACTTCCGTAGGGGATGGACTCAGTATTTGCAGGCGCATTGCCTGA 729 0.4156 MENIKDPSSYRTPVLLQSEELIKYILETAIYPREPKPLKELRDATQNHPSYSFRSFIATSPDAGQLITILLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAAVEHKIDFIESPALPILDKLLEDPANEGTYEFAYIDADKENYVNYHERLIKLVKVGGLLVYDNVLWGGRVAWPEEEVPLHARSATQAIIEFNKRITQDSRVEFAFTSVGDGLSICRRIA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi976g00016 242 CDD AdoMet_MTases 80 184 - -
Gabi976g00016 242 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 240 IPR029063 -
Gabi976g00016 242 Pfam O-methyltransferase 34 241 IPR002935 GO:0008171
Gabi976g00016 242 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 241 IPR002935 GO:0008171
Gabi976g00016 242 PANTHER O-METHYLTRANSFERASE-RELATED 12 241 - -
Gabi976g00016 242 Gene3D Vaccinia Virus protein VP39 8 242 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi976g00016 Gabi-Chr976 137130 138806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi976g00016 15 241 Monolignol Biosynthesis Gene Families AT4G26220 60.793 7.89e-103 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi976g00016 K00588 - gmx:100800911 395.971