Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi976g00001 ATGGCTGCGGCGGTCATCGGCAGGTTGAAGAGGGAACAATGCAATCGAACAAATCACGATTCTAACTTCTCACATTGGAAGATTCTGATTGGCCCTTCTGATTGGGAAGATTATTCCAAAGGGAAGGAAGGATCTGCAAGGTACAGGATTCAAAACCTCCCAGGAAAAACAGGTCCAGGAGTGTATGAACTTGGAATAGCTGTGTTGAGTAATAATGGTTTGGGGCGTGAAATTTACAAGCTTGCCACTGACCCTGAACGCATAGTTGTAGTTTACCTTGGACAAGCTGACAATGTAAGAGCAAGACTCCAACGTTATGGAAGAACTGGTGCTCATTTGGGGAATAGTTGTTCAGATGATTCTTCTCTTCAAAAGGGGAGGCCATTGTTTCAAGAGATATTTTCACAAGGCTTCCCTATCGTTTATAGATGGGCTCCTATGCAAAACAAGGGAGATGCCCTGAGAACAGAAGCTCAGCTGCTCAGTACATTTGATTATGCATGGAACACAAGCAATAATGGGAACCGGAGGCCTGATGAAATTCTTCAAAAGCTCAACAAAATTGCTTCGGGTACTAGAACATTTTCAGATGTAGCCAGAGTGCTTCTACCTTTCACTCAGAAGCAAGTGGGTATCCGAATTAAATCAAGCATGCAGCCTCTGAAAGATGACAAATCAGATGAAGAATACAATGGCAACTATAATTTCCTATCTCGAGTATTCAAATTTAACAGATCACGTCCTCGGATAGTTCAGGATATCCCTGTGGTCATTCAGGAGAATGCTAAAATTTGTGGAGTGATGTTGGGTGATGGTTCTGTTTGTAGAAGGCCACCAGTTGAAAAAAGAGTAAGGTGTCCTGAACACAAAGGAATGAGAACAAATGTGTCCACTGCCAAAACAATCAGGGCACCCAAGTCTGAGAGCATTGTGGTACCAGAACACAATGTGTATTGTCAAACAAAGGGCAATGGCTACAGATACCAAAATGTCAGCCATGATGCAGAAGACCCTCCTCCACAAACAGTGGTTGAGAGTGCCGTTGATGAGAATAACACCAACACAAATATATGTGGAATCATCTTGAATGATGGCTCCACTTGTAGAAGACAACCAGTTAAAGGAAGAAAAAGGTGCCAAGAGCACAAAGGGAAGAGAATCAGTGCATCCATTCATATAAATCAGAAATAA 1191 0.4249 MAAAVIGRLKREQCNRTNHDSNFSHWKILIGPSDWEDYSKGKEGSARYRIQNLPGKTGPGVYELGIAVLSNNGLGREIYKLATDPERIVVVYLGQADNVRARLQRYGRTGAHLGNSCSDDSSLQKGRPLFQEIFSQGFPIVYRWAPMQNKGDALRTEAQLLSTFDYAWNTSNNGNRRPDEILQKLNKIASGTRTFSDVARVLLPFTQKQVGIRIKSSMQPLKDDKSDEEYNGNYNFLSRVFKFNRSRPRIVQDIPVVIQENAKICGVMLGDGSVCRRPPVEKRVRCPEHKGMRTNVSTAKTIRAPKSESIVVPEHNVYCQTKGNGYRYQNVSHDAEDPPPQTVVESAVDENNTNTNICGIILNDGSTCRRQPVKGRKRCQEHKGKRISASIHINQK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi976g00001 396 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 340 390 IPR038909 GO:0003677|GO:0006355
Gabi976g00001 396 Pfam GIY-YIG domain-containing protein 23 182 - -
Gabi976g00001 396 SMART uri_9 78 174 IPR000305 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi976g00001 3 393 HRT Transcription Factor Family AT5G56780 41.191 1.03e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Gabi976g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi976g00001 - - lang:109350609 522.316