Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi975g00003 ATGTTTACCCGAAACCGGCATTTGCGGTCTTCTTCTTCGTCCTCTGAGAAGAGGTCCTCCGTTTCAGAAAATTCAAGCAAGAAGGTCAATACCGTGAAGACCCATTTGACAAAGAAGCGTACCCCTCTCGCCGACGTAAGCAATAACAGAAATGCCTCTCTCGCCGGTGCAAAGACCTCCATTTCTGCTCCATCCAACCCTTTGGTTCCATGTGTGTCAAAGACTGCCAAGACGAAGGATTCTATTGCCAGTTCGCAGAAAAAAGTTATGACCGGGAAGACTTTGAAAGCCTCATTGAGCATAAAATCAAGTGAGTTGGTACTTTCCAAAGACGCATGTTCAACCAGAAGTAGTCAACCTAAGGCTGGAGTTGGAGCCTTCCCTGCTCCAAGCACTGATGTTGCTGTGTGTCCTGATTTGAATATTGGGGTCATTTCTCCAAGTAAATCCTTTAGCGGTTCAGTTTCACTGGATGAGAGCATGTCAACCAGTGATTCTTTGAAGACCCCGGAATTCGATTATATTGACAGTGATGATCTCGTATTGACCAAATCAATTGATAATAAGACATGTAGCACACTCAATGTTTCAGACTCTTCATTACTAGCAGGGAGAATATGTGGTAGTGATACTATCAAGAAGATAGAAGCAAATGAAGTTGTGGATATTGACTACAATGTCAAGGACCCACAATCCTGTGCACTATTTGCCCATGAAATCTATGAATGTTTGCGTAAATCTGAGGAAATTAAAAGGCCGTCTATGGACTATATGGAGAGGATACAGAAAGACCTCTATCCTATCATGAGGGCCATACTCATTGATTGGCTTGTGGAGGTTGCCGAAGAGTACAGGCTTCTACCTGACACGCTATTTTTGACAGTTAATTACATTGATCGCTATCTTTCTGGAAATGCAATGCATAGGCAGCGATTACAATTACTTGGTGTTGCCTGCATGCTGATTGCTGCCAAATACGAGGAGATCTGTGCCCCTAAGGTGGAAGAGTTCTGTTATATAACTGATAATACATATTCTAAGGAGCAGGTGTTTCAGATGGAATCTGCTGTGCTTAATTTCTTAAAGTTTGAAATTACAGCTCCAACAGCCAGATGTTTTTTAAGGCGCTTCATTATTGTTGCCAAACGTACCTGTGAGGTTCCATTGATGCAGTTGGAGTATTTGGCAGACTATCTCGCAGAGTTATCTCTTATAGAGTATGGCATGCTTAAGTACTCCCCATCGTTAATTGCTGCGTCAGCCACTTTCTTGGCTATATACATACTGCTTCCGAGGAAGAAACCTTGGAATTCTACGCTAAGGCATTACACCGGTTACCAAGCATCAGAATTGTGTGAATGTGTCAAGGGATTGCATTTGTTGTGCTGCGATGGCTGTCATGATTTACCCGCTATCAGGGAGAAATACAGTCAGCATAAGTTCAAGTTTGTGGCAAAGGAATATTGTCCTCCATCAATACCTCTAGATATATTCGGCAACTAA 1503 0.4258 MFTRNRHLRSSSSSSEKRSSVSENSSKKVNTVKTHLTKKRTPLADVSNNRNASLAGAKTSISAPSNPLVPCVSKTAKTKDSIASSQKKVMTGKTLKASLSIKSSELVLSKDACSTRSSQPKAGVGAFPAPSTDVAVCPDLNIGVISPSKSFSGSVSLDESMSTSDSLKTPEFDYIDSDDLVLTKSIDNKTCSTLNVSDSSLLAGRICGSDTIKKIEANEVVDIDYNVKDPQSCALFAHEIYECLRKSEEIKRPSMDYMERIQKDLYPIMRAILIDWLVEVAEEYRLLPDTLFLTVNYIDRYLSGNAMHRQRLQLLGVACMLIAAKYEEICAPKVEEFCYITDNTYSKEQVFQMESAVLNFLKFEITAPTARCFLRRFIIVAKRTCEVPLMQLEYLADYLAELSLIEYGMLKYSPSLIAASATFLAIYILLPRKKPWNSTLRHYTGYQASELCECVKGLHLLCCDGCHDLPAIREKYSQHKFKFVAKEYCPPSIPLDIFGN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi975g00003 500 FunFam Mitotic cyclin 6 253 353 - -
Gabi975g00003 500 SMART cyclin_7 275 359 IPR013763 -
Gabi975g00003 500 SMART cyclin_7 372 460 IPR013763 -
Gabi975g00003 500 Pfam Cyclin, N-terminal domain 239 365 IPR006671 -
Gabi975g00003 500 Gene3D - 239 486 - -
Gabi975g00003 500 Pfam Cyclin, C-terminal domain 368 486 IPR004367 -
Gabi975g00003 500 ProSitePatterns Cyclins signature. 270 301 IPR006671 -
Gabi975g00003 500 FunFam Cyclin A1 356 486 - -
Gabi975g00003 500 SUPERFAMILY Cyclin-like 228 365 IPR036915 -
Gabi975g00003 500 PANTHER CYCLINS 179 478 IPR039361 -
Gabi975g00003 500 MobiDBLite consensus disorder prediction 1 31 - -
Gabi975g00003 500 SUPERFAMILY Cyclin-like 368 492 IPR036915 -
Gabi975g00003 500 PIRSF Cyclin_A_B_D_E 1 494 IPR046965 GO:0016538|GO:0044772
Gabi975g00003 500 CDD CYCLIN_AtCycA-like_rpt2 368 481 - -
Gabi975g00003 500 Gene3D - 253 366 - -
Gabi975g00003 500 MobiDBLite consensus disorder prediction 1 50 - -
Gabi975g00003 500 SMART Cyclin_C_2 368 490 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi975g00003 Gabi-Chr975 90016 94784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi975g00003 20 500 Core Cell Cycle Gene Families AT1G44110 50.928 3.99e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi975g00003 K06627 - qsa:O6P43_019779 585.874