Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi969g00001 ATGGATTCACTCCTAAATTACCTAAACACCACTGCACTTGCAGTACTCCTTTCAATAATCTTCTTGCTTTTGTGTCTGTATCATCATTCCAAAGTTGCTCATAATAGAGAGGCTCCAACAGTTGCAGGTGCATGGCCAATACTTGGTCACCTTCCATTGTTGAATAGTTCAAAGACACCCCATAGAACATTAGGTGCCTTAGCTGACAAGTATGGACCCTTATTCACCATCAAGCTTGGTGCCAAACCAGCTTTGGTACTCAGCAACTGGGAAATGGCTAAGGAATGTTTCACCACAAATGACATTGCAGTTTCATCTCGTCCAAAACTTGTTGCTGGTGAATGCATGTCTTACAACCAAGCTTTCATTGGTTGGTCACCATATGGACCATATTGGCGTGAACTACGTAAGATTGTTACTTCTGAGTTTCTATCAAATCGTAGAATCAAGCTATTAAGTCACATTCGTGTCTCCGAAGTTCAAACTTCGATTAAAGAGCTCCTAAGTGTTTGGTCTAGTAGCACAAAGAATGAGTCTAACTATGTGTTGTTGGAGCTGAAACAGTGGTTTTCTGAGTTAACATTTAACATGGTTCTCCGAATGGTGGTTGGCAAGAGGTATTTTGGTGCTACTGATGTTGCCAACAATGATAAAGCAGAGAGGTTTCTGAAGAATATATGGGAGTTCATGCGTTTGATGGGGACTTTCACTGTGGCAGATGGTGTTCCTTCTTTAAGATGGTTGGATATTGGAGGGTATGAGAAAGCAATGAAAGAAACTGCAAAGGAAATGGACAAAACTTTAAGTGAATGGTTAGAGGAACACAGACAGAAGAGGGTTTTGGGTGAAAAGATTGTAGGTGATCGAGACTTCATGGATGTGATGCTTTCGGTGCTTGATGACACACAGAATATTGAAGGGTTTGATGCTGATACCATATTCAAAGCCTCAACATTGGAATTGATTGTGGGAGGAACTGACACAACCGCGGTTACCCTTACATGGGCAATGTGTTTGCTATTGAGAAATCCTCTTACATTGGAAAAAGCTAAAGAAGAACTTAACACACATGTTGGGAAAGAGAGATGTGTTAGTGAATCAGATATAAATAAACTAGTATATCTTCAAGCTATAGTTAAAGAGACTCTAAGATTGTATCCACCAGCCACTATCTCATCACCCCGTGAATTCACAGAGAATTGCACTATAGGTGGTTACCATGTTAGAAAGGGAACTCGACTAATGCCAAACCTATGGAAGATCCACAGAGACCCTAGTGTTTGGACAGATCCATTGGAGTTCAAACCAGAAAGGTTCCTTACCACTCACAAAGAGGTTGATGTTAAGGGTCATCATTTTGAGTTGTTACCATTTGGAAGTGGCAGAAGGATTTGTGCTGGAATGTCCCTTGGCTTGAGTATTGTTCATTTCACTTTGGCCAGTTTTTTGCATTCCTTTGATATCTTAAATCCATCTACTGAACCTATTGATATGACTGAATCCTTTGAATTTACCAACACCAAAGCCACCCCACTTGCGGTTATGGTTAAACCATGTTTGTCTCCCAACTGTTATGAAACTATATGA 1587 0.4045 MDSLLNYLNTTALAVLLSIIFLLLCLYHHSKVAHNREAPTVAGAWPILGHLPLLNSSKTPHRTLGALADKYGPLFTIKLGAKPALVLSNWEMAKECFTTNDIAVSSRPKLVAGECMSYNQAFIGWSPYGPYWRELRKIVTSEFLSNRRIKLLSHIRVSEVQTSIKELLSVWSSSTKNESNYVLLELKQWFSELTFNMVLRMVVGKRYFGATDVANNDKAERFLKNIWEFMRLMGTFTVADGVPSLRWLDIGGYEKAMKETAKEMDKTLSEWLEEHRQKRVLGEKIVGDRDFMDVMLSVLDDTQNIEGFDADTIFKASTLELIVGGTDTTAVTLTWAMCLLLRNPLTLEKAKEELNTHVGKERCVSESDINKLVYLQAIVKETLRLYPPATISSPREFTENCTIGGYHVRKGTRLMPNLWKIHRDPSVWTDPLEFKPERFLTTHKEVDVKGHHFELLPFGSGRRICAGMSLGLSIVHFTLASFLHSFDILNPSTEPIDMTESFEFTNTKATPLAVMVKPCLSPNCYETI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi969g00001 528 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 FunFam Cytochrome P450 82C4 28 517 - -
Gabi969g00001 528 SUPERFAMILY Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 CDD CYP82 72 519 - -
Gabi969g00001 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Gabi969g00001 528 PANTHER CYTOCHROME P450 82C3-RELATED 16 525 - -
Gabi969g00001 528 Gene3D Cytochrome P450 25 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi969g00001 528 Pfam Cytochrome P450 42 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi969g00001 Gabi-Chr969 148 2684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi969g00001 8 518 Cytochrome P450 AT4G31940 46.911 2.81e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi969g00001 - - gmx:100779366 805.823