Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi968g00006 ATGGAGATGGTTTCAGCCGCCTCCAATGGAAGTTCCGCCGGAACCAAGACAAGGGACATCGACGACCTTCTCGCCGGCGTCGGCTACAAAGTCCGGTCATCGGAGCTCCGTCAAGTTGCTCAAAATATTGAACGCCTGGAGAACGTTATCGTGAACTCATCCGCCGACATTTCTCAACTTGCTTCCGACACCGTCCACTACGACCCCTCCGACATCGGATCCTGGGTGGACACTCTTCTCTTCGAGTTCGACCACACCGTATCCTTACCCTACGATCTCTCGGACTTACCTGATCTCGCCGCAGCTCCGCCACAAGGTCACCACAACCACCACCGTCAGTTAACAACCACCGTGGAAGAAGACTCGGGGATAAGGCTTGTCCACATGCTGATGACGTGTGCGGAATCTCTGCAACTTGGCGACCTCGCATTCGCTGGCTCTCTCATCGAGGGCATGCAGGGTTTGTTGGCACACGTCAACACCAATTGCGGCATCGGAAAAGTCGCCGGCTACTTCATCGACGCCTTGAGCCGCCGTATCTTCGCGCCGCCGTCGCAGCTTCAAAACATCATCTTAGGCTCTCCTTACGAGAACGATGTTCTGCATCATCACTACTACGAGGCTTGCCCCTACCTCAAGTTCGCTCACTTCACCGCAAACCAAGCCATCCTTGAATCCTTCAACGGTCACGATTGCGTCCACGTCATCGATTTCAACCTCATGCAGGGTCTCCAGTGGCCTGCGCTAATACAAGCCCTCGCGCTTCGTCCTGGTGGGCCCCCCTTGCTCCGGTTGACTGGCATTGGTCCACCGTCGCCGGACGACCGCGACACGCTCCGGGAAATCGGGTTGCGGCTTGCCGAGTTGGCTCGCTCCGTCAACGTCAGATTCGCGTTCCGCGGCGTGGCGGCGTGGCGTCTCGAGGACGTGAAACCGTGGATGCTTCAGGCGAGTCCTAAGGAAGCGGTGGCGGTTAACTCAATCTTGCAGCTTCACCGTCTCCTCGGGTCTAAAGCTGATCCGATCCAATCGGGTATTGAAATGGTGCTTGGTTGGATCCGGACTTTGAACCCGAAAATAATGACAGTTGTGGAGCAGGAAGCGAACCACAACGAGAACGGGTTCTTGGAGCGGTTCACGGAGGCATTGCATTATTACTCGACCATTTTTGATTCGCTGGAGGCGTGTCCGGTCGAACCGGATAAGGCTATGGCAGAGGTGTATCTGCAGAGGGAAATATGCAACGTGGTGTGTTGCGAAGGATCGGCTCGGGTGGAGAGGCATGAGCCGTTGACTAAGTGGAGGGAACGACTCGGGAAAGCCGGGTTCAGGCCTCTTCATTTGGGTTCGAACGCGTTCAAGCAAGCAAGCATGCTTTTGACTCTGTTCTCTGCGGAGGGTTACTGCGTCGAAGAGAACCAAGGTTGCTTGACTTTGGGTTGGCATAACCGCCCTCTCATTTCTGCTTCGGCTTGGCAAGCTTTGCCTCCACGAGACAGCGAAACGCTGCGTTTAGATAGCTGA 1524 0.5571 MEMVSAASNGSSAGTKTRDIDDLLAGVGYKVRSSELRQVAQNIERLENVIVNSSADISQLASDTVHYDPSDIGSWVDTLLFEFDHTVSLPYDLSDLPDLAAAPPQGHHNHHRQLTTTVEEDSGIRLVHMLMTCAESLQLGDLAFAGSLIEGMQGLLAHVNTNCGIGKVAGYFIDALSRRIFAPPSQLQNIILGSPYENDVLHHHYYEACPYLKFAHFTANQAILESFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSPDDRDTLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQASPKEAVAVNSILQLHRLLGSKADPIQSGIEMVLGWIRTLNPKIMTVVEQEANHNENGFLERFTEALHYYSTIFDSLEACPVEPDKAMAEVYLQREICNVVCCEGSARVERHEPLTKWRERLGKAGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENQGCLTLGWHNRPLISASAWQALPPRDSETLRLDS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi968g00006 507 Pfam GRAS domain family 126 493 IPR005202 -
Gabi968g00006 507 Coils Coil 36 63 - -
Gabi968g00006 507 Gene3D - 19 83 IPR038088 -
Gabi968g00006 507 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 112 489 IPR005202 -
Gabi968g00006 507 SMART DELLA_2 21 98 - -
Gabi968g00006 507 ProSiteProfiles GRAS family profile. 117 493 IPR005202 -
Gabi968g00006 507 FunFam DELLA protein GAI 19 83 - -
Gabi968g00006 507 Pfam Transcriptional regulator DELLA protein N terminal 21 86 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi968g00006 Gabi-Chr968 163558 165167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi968g00006 20 493 GRAS Transcription Factor Family AT1G14920 49.903 4.98e-167 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi968g00006 GRAS 3.4e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi968g00006 K14494 - gmx:100805968 763.837