Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi962g00005 ATGGCCTCCATGCCCTTGGGGCCGAACCACCACCAACCACCGCTGGCAGTGGCTCCGCAACCGCAACAACCGCCGCAGTTTCAGGCGCAAGCTGAAGTGGCTCGACGGAGCTCCGATGTGGAGACCGATAAGGAAATGTCAGCTACTGTCATCGAAGGGAATGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGTGAACCTAAACGGACCATCAGTTACATGGCAGAACGTGTTGTCGGCACTGGATCATTTGGAGTTGTTTTCCAGGCAAAGTGTTTGGAGACTGGGGAGGCAGTGGCTATAAAAAAAGTCTTGCAAGACAGGCGGTACAAAAATCGTGAGCTGCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCCCTGAAGCACTGTTTCTTCTCGACAACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCTGAGACGATGTACCGAGTTTTAAAACACTACAATACTATGAACCAGAGAATGCCCCTCATCTATGTGAAACTATATACATATCAAATCTTTTGGGGATTAGCATATATACATACCGTACCGGGGGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTCATCCCCTTACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCTAAAGTTCTGGTCAAGGGGGAATCAAACATTTCATACATATGTTCACGTTACTATCGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTCGCTGAACTTCTTCTAGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGATCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTTCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCACAAACGAATGCCTCCAGAAGCAATTGACCTAGCATCAAGGCTTCTCCAATATTCACCTAGTCTTCGCTGCACTGCGCTGGAAGCATGTGCACACCCTTTCTTTGATGAGCTTCGTGAGCCAAATGCCCGACTACCTAATGGCCGCCCACTGCCGCCCCTTTTCAACTTTAAACAGGAATTAGCTGGAGCATCACCTGAACTGATCAATAGGCTCATCCCAGAGCACATTAGGAGGCAGACTGGTCTCGGCTTCCCTCATCCGGCTGGTACATAG 1260 0.4619 MASMPLGPNHHQPPLAVAPQPQQPPQFQAQAEVARRSSDVETDKEMSATVIEGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYNTMNQRMPLIYVKLYTYQIFWGLAYIHTVPGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELAGASPELINRLIPEHIRRQTGLGFPHPAGT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi962g00005 419 ProSiteProfiles Protein kinase domain profile. 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi962g00005 419 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 43 408 - -
Gabi962g00005 419 CDD STKc_GSK3 74 366 IPR039192 -
Gabi962g00005 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Gabi962g00005 419 MobiDBLite consensus disorder prediction 1 26 - -
Gabi962g00005 419 SMART serkin_6 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi962g00005 419 FunFam Shaggy-related protein kinase kappa 159 406 - -
Gabi962g00005 419 Pfam Protein kinase domain 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi962g00005 419 FunFam Glycogen synthase kinase-3 beta 63 158 - -
Gabi962g00005 419 ProSitePatterns Protein kinases ATP-binding region signature. 85 109 IPR017441 GO:0005524
Gabi962g00005 419 SUPERFAMILY Protein kinase-like (PK-like) 78 387 IPR011009 -
Gabi962g00005 419 Gene3D Transferase(Phosphotransferase) domain 1 159 406 - -
Gabi962g00005 419 Gene3D Phosphorylase Kinase; domain 1 64 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi962g00005 Gabi-Chr962 31257 36520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi962g00005 83 401 MAP Kinase Gene Family AT3G59790 34.731 9.36e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gabi962g00005 Pkinase 6.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi962g00005 K14502 - gmx:100810924 784.637