Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi961g00001 ATGGAGAAAGATTTGGTTCACCGTTTCCATAAAAGGAAAAGATCCAGCAGCAATCCAGTCCAGAAACATACGCGACGCAGGCTTACTACTATTGAATATGAATACATACCTCTGCCGGAAGATGAAGAAGAAGAACTGGTAGAGGAGGAAGTAGTTGAGAAAGTGGTAGAGAAAGAAGAAGAAGAAGAACCAGTAGAGGAGGAAGAGGAAGAAGATCCAGAAGAGGAAGAAGAAGAAGAACCAGTAGAGGAGGAAGAGGAAGAAGATCCGGAAGAGGAAGAAGAAGATCCGGAAGAGGAGGGAGAAGGCTGCGAAATTGAGTTGGAAGACTATGTGCATTGCCAAGGGAGTGAAAATCATGATGAGGATGTTGGAGAAAACAATCCTATGGAAGATGATGAAGCAACATCTAAGTTTAAGGGCATAGACCCTATTTCTGCCACCCTTTCTAACCCTAAAGTCCTCGACTGCTGCAGCTGCTGTCAACCATTGACTATTCCTGTCTTCCAGTGCGAGAAAGGGCATTTTGCTTGCTTTACCTGTTGTGCTCTTGGAAGGGAGTGTCTTGAGTGCTCATCTCGCATTCATTACAACCGTTGCAAAGCTATTGAGAAAGTGTTGGAATCTATTAACATATCATGCCTTAATGCAAAATATGGTTGCAAAGAGACATTGAGTTACAGTGAAAGGAATAACCATGAGAAGAAATGTATCTACATTCCATGTTTATGCCCACACAAAGGTTGTGACTTTATACATTCCTACAATAACTTACATTCCTACAATGATTTTTATAACAGTTGCATGATAGCAGTTACATTCCTACAATAA 831 0.4128 MEKDLVHRFHKRKRSSSNPVQKHTRRRLTTIEYEYIPLPEDEEEELVEEEVVEKVVEKEEEEEPVEEEEEEDPEEEEEEEPVEEEEEEDPEEEEEDPEEEGEGCEIELEDYVHCQGSENHDEDVGENNPMEDDEATSKFKGIDPISATLSNPKVLDCCSCCQPLTIPVFQCEKGHFACFTCCALGRECLECSSRIHYNRCKAIEKVLESINISCLNAKYGCKETLSYSERNNHEKKCIYIPCLCPHKGCDFIHSYNNLHSYNDFYNSCMIAVTFLQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi961g00001 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 260 IPR013083 -
Gabi961g00001 276 Pfam Seven in absentia protein family 199 258 IPR018121 GO:0005737|GO:0006511|GO:0007275
Gabi961g00001 276 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 93 259 IPR044286 -
Gabi961g00001 276 ProSiteProfiles Zinc finger SIAH-type profile. 209 267 IPR013010 GO:0008270
Gabi961g00001 276 MobiDBLite consensus disorder prediction 1 103 - -
Gabi961g00001 276 SUPERFAMILY TRAF domain-like 209 260 - -
Gabi961g00001 276 MobiDBLite consensus disorder prediction 36 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi961g00001 Gabi-Chr961 7880 11035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi961g00001 154 248 C3H Transcription Factor Family AT2G41980 31.250 2.82e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi961g00001 K04506 - qsa:O6P43_009323 170.629