Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi955g00011 ATGAACACAGGAAGGAACAGGTTCCCCTTCACTGCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAGTACATGGCTTCAGGTATCACCATCCCACCTGATCTTCTCTTCACTATCAAAAGAAGCTATTTGGATTCTCCACTTTCCTCAAGGCTTTTGCCTAATCAGCCCCAACAGTTTGGATGGAACTATCTGCAGATGGGTTTGGGAAGAAAAATAGACCCAGAACCAGGTAGGTGCAGAAGAACTGACGGAAAGAAATGGAGGTGCTCCAAAGAGGCATACCCGGATTCAAAGTACTGTGAGAGGCACATGCATAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAATAGCAACAAACACAAATGCTTCAACATCTTCAATCTCGTCAATCACCAAAAATAGTCATTCACTAACCCCAACCACTCAATCTTTCTCACCTCTTACACCTTCTGAAACACACCATCAACATTCTTGTTATGGTTCCAATCTCCACCACTCCTTTCTCTATCATCATCCACCATCAAGGTCTTTTGAAGACAACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAAACTAACACTGACTGCAGAAATAGGTATGTTTATGGAGAGAAAGAGGAGGTGGATGAGCATGCTTTCTTCACAGAGCCTTCTGGTATTATGAAAAGCTTCTCTGCTTCATCTATGGATGATTCTTCATGGCAATTCACACCACTGACTATGAACTCTTCATCATCATGTTCTTCTTCAAAACAGAGGACTTGCTCTGGTTTGTCAAATGATTACTCTTACTTGCAACTTCAGAGCCTCAGTGACCGCTCAAAACAACAGCAAGAGCAAGATCAGGGTTGCTATATATTAGGTGGTGAAATCAAGTGTGAGACACTGATGAAACTGGGAAAACAAGAACCTGAAAAAACCGTTCATCGCTTCTTTGATGAATGGCCACACAAAGGTAGAGGCTCATCATGGCTTGATTTGGATGATAAATCATCCACTACCCAACTTTCAATTTCCATTCCCACCTCTACTCATGATTTTCAAACCTTCAATTCCAGAACCCACCATGATGGTTGA 1119 0.4236 MNTGRNRFPFTASQWQELEHQALIYKYMASGITIPPDLLFTIKRSYLDSPLSSRLLPNQPQQFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTIATNTNASTSSISSITKNSHSLTPTTQSFSPLTPSETHHQHSCYGSNLHHSFLYHHPPSRSFEDNNSAPLFLDTGSCSQTNTDCRNRYVYGEKEEVDEHAFFTEPSGIMKSFSASSMDDSSWQFTPLTMNSSSSCSSSKQRTCSGLSNDYSYLQLQSLSDRSKQQQEQDQGCYILGGEIKCETLMKLGKQEPEKTVHRFFDEWPHKGRGSSWLDLDDKSSTTQLSISIPTSTHDFQTFNSRTHHDG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi955g00011 372 Pfam WRC 78 120 IPR014977 -
Gabi955g00011 372 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Gabi955g00011 372 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi955g00011 372 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi955g00011 372 PANTHER GROWTH-REGULATING FACTOR 5 8 360 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gabi955g00011 372 MobiDBLite consensus disorder prediction 137 162 - -
Gabi955g00011 372 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi955g00011 Gabi-Chr955 134203 135860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi955g00011 7 120 GRF Transcription Factor Family AT3G13960 71.053 2.74e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gabi955g00011 WRC 7.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi955g00011 - - gmx:100781613 541.576