Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi955g00004 ATGCCTCCTATGTCAACGATTCCAATTCACAGACCTGAATTCCATGCCTTATTCTTCAATGGGTCTCCAAGTCCTTTCAAATTCCCAAGAATGGCTGCTTCATGGACCATGACCATGGATTCGAGATTTTCCCCCACAATGAATACTAATAACAATATGAAGAAGAAGGAAGAACTCTCTGTGCAGCTTTCAACGCCACCCGTTCCAAAAGTGGAAACTTTTAGCTCCAACAACCTCCAATTTGACCGTTTGCAGCCATCGGATCAAGAATTGGTTCGAGAAAATAAGTTTGATTTTGGGCAATTTGTTGCACGAGAAGCCGTGCTTGATGAAGAGTATTGGACAGCAGCATGGCTAAGGGCAGAAAGTCACTGGGAGAATCGAACATATGAAAGATATGTTGATAACTACAAAAGGAAATTTGCTGAGCAGGAATTTAATGCGGTAAAAAGGCGGTGCAAGGTGCAAAACGGGGATAGCTGCTCATGCATTATCGCGGTGAGAAAGGAGCAGAAGAATGTAAAGCACTCAATATTAAAAAGTGTTGTAGGAACCCTTGATTTGAATATCCGATATTTTCTGCAAGGGGAGACCTTTCCTGGGGAACGGGTAAAGGCTCCTCTTTTTTGCAACATCAAAAGAACACCACCAAGCAGATATGCCTACATTGCAAACTTGTGCGTTGCTAAATCAGCTCGACGACAGGGAATTGCAAGCAACATGATATATTTTGCTGTTGAAACTGCAAAATCGAATGGTGTGACACAGATATATGTGCATGTGGATAGAAATAATAGTCCTGCACAGATATTGTACCAAAAGATGGGCTTCGAGCTTCCTCGTCTTTTTCAGATGGTTGAAACGGCAAACTCCCGATTGTTACTAGAGGAAACATACTTGCTACGTTTACAGATGTAA 918 0.4205 MPPMSTIPIHRPEFHALFFNGSPSPFKFPRMAASWTMTMDSRFSPTMNTNNNMKKKEELSVQLSTPPVPKVETFSSNNLQFDRLQPSDQELVRENKFDFGQFVAREAVLDEEYWTAAWLRAESHWENRTYERYVDNYKRKFAEQEFNAVKRRCKVQNGDSCSCIIAVRKEQKNVKHSILKSVVGTLDLNIRYFLQGETFPGERVKAPLFCNIKRTPPSRYAYIANLCVAKSARRQGIASNMIYFAVETAKSNGVTQIYVHVDRNNSPAQILYQKMGFELPRLFQMVETANSRLLLEETYLLRLQM 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi955g00004 305 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 209 305 IPR000182 GO:0016747
Gabi955g00004 305 Pfam Acetyltransferase (GNAT) family 133 277 IPR000182 GO:0016747
Gabi955g00004 305 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 304 - -
Gabi955g00004 305 CDD NAT_SF 209 260 - -
Gabi955g00004 305 Gene3D - 95 286 - -
Gabi955g00004 305 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 132 279 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi955g00004 Gabi-Chr955 30298 33157 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi955g00004 Acetyltransf_1 9.5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi955g00004 - - gmx:100795426 476.092