Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi953g00004 ATGACAATGCCGGAACAGAAGAACAAGAAGGTCTCCTTCACTGAGGAAGATGCTGCTGCTCTCACGCTGAGGTATGACGAAACCACAGTGTTAACGTTGCTTCAGGAAGTGGCGAATTATCCTTATTCGAAGATTGATTGGAATGATTTGGTCAAGAAAACCTCGACTGGGATTTCTAATGCCAGGGAGTATCAGATGCTGTGGCGTCACTTGGCTTACCATGATGCCTTGGAGGAAAATTTCGAAGACGGGGCTGAACCTCTGGATGATGATAGTGACCTAGACTGTGAAATGGAAGCATTACCCCCTGTAAGTGTGGAATCTGCATCGGAGGCTTCAGCATGTGTGAAGGTAATGATTGCTTCTCGTACGCTAAGTGAATCTACCCCTAGTAGCTCAACAATTGAGGCTCCATTGACTATAAATGTTCCAGTTTGCCATTCATCTAGGACTCCTAACGAAAGTTCACAGCCCAATAATTTGATGCAAGGTTCAAACATTATTTTCCCCGTTACTGTTCAGAGGCAGACACTGCCAACTGCATCATCAACAGACGGTATAGAAACCAAGGGATCAGTTGGTGGCAACATGGCTTCAAAAAGAAAAAGAAAAGCATGGTCAGAGGAAGAGGACATGCAGCTACGAGCTGCTGTTCAGAAATGGGGTGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTCCTACACAGTTGGCTCAGAGGTGGAGCATTTTACGTAAGAAAGATGGCAGTGCCAATTCAGGAACCATCTTGACCAGCACACAATATACTACTGCTGAACAACTGGCAACTCGTCATTCTTTATCCTTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGAATGACTGATCCTGCTAGGACATCCACATCAATTAAAAATCAAGTGCAAACTTGCAATGCCACAGAAGGTTCAACGGTTCACAACAGCTTTGTACCACCATCTCAGCATCCATCTCAACAAGCTTTGCTGGGATCTTGTGGTTCCTCTGCAAAACCTAAATTAGTCTCTGGAAAATCAATCCCAAAGTGTAATCCAATGCCAAATACTTCTGTAAAATCTACCACAGTTGTTTCCCCATTAAATACTGGATCACAACATAAGGTTGCTCAAGCAAGAAATGTTATAGTTACAGGCAACTCTTTGACAAAGACATCCGTGTCTGGTGGCTTGCCTAACAACCCAAAGGTTCAATCAAATGTACCTTATGTTTGCACCAGTTCAACTGCTGCTTCTGCCCTTGCTGTCATATCTCCTGGATCATGCTCTAGTACAGTAAAAGGCGCCTCATATAAGGTGGAGAATTCAGCTACAACTTTGTCTCGACATGACAAATCAGTTACCTCTGTGGTTGAAGAAGTTCCATTGAAACAAGTTAATCCCACAGAAAAATTTAAAGCTTTTAATACTATTCCTACACCAAAAGAGATGGTGCAAGAAGATGAGAATTCTACATTTACTGCTGAGAATCGTGTCATGGCAATAGATACCAAACTGGATAAGGGGAGTATAGATTTTGATAAAGTTAAGAGCGTGTCTCTTGTGAAAATTACAAGTGAGGATATTTCCGAAGATAAAGCAGTTCCACAAAATCTAGGGAAATGTGAAGAGACAGGAGCGGTTAAGAATTCAAATTTTACATTCAGTATGGAAATTAATGAGAATAACAACCTGGACAAGGGGAATCAAGATTTAGACCATGATAAGAGGACAAATTCAATTAATGGAAGTTCTGACAATCAGAACATGAACGTGAACCAGGTAAATTTGGCAAGTGTGGTATTAGATGAATGCAGTCAAGGTCTGGAATTGTCAAGTTAG 1866 0.4175 MTMPEQKNKKVSFTEEDAAALTLRYDETTVLTLLQEVANYPYSKIDWNDLVKKTSTGISNAREYQMLWRHLAYHDALEENFEDGAEPLDDDSDLDCEMEALPPVSVESASEASACVKVMIASRTLSESTPSSSTIEAPLTINVPVCHSSRTPNESSQPNNLMQGSNIIFPVTVQRQTLPTASSTDGIETKGSVGGNMASKRKRKAWSEEEDMQLRAAVQKWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGSANSGTILTSTQYTTAEQLATRHSLSLALDMPFKKLTAPGMTDPARTSTSIKNQVQTCNATEGSTVHNSFVPPSQHPSQQALLGSCGSSAKPKLVSGKSIPKCNPMPNTSVKSTTVVSPLNTGSQHKVAQARNVIVTGNSLTKTSVSGGLPNNPKVQSNVPYVCTSSTAASALAVISPGSCSSTVKGASYKVENSATTLSRHDKSVTSVVEEVPLKQVNPTEKFKAFNTIPTPKEMVQEDENSTFTAENRVMAIDTKLDKGSIDFDKVKSVSLVKITSEDISEDKAVPQNLGKCEETGAVKNSNFTFSMEINENNNLDKGNQDLDHDKRTNSINGSSDNQNMNVNQVNLASVVLDECSQGLELSS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi953g00004 621 Gene3D - 196 258 - -
Gabi953g00004 621 SUPERFAMILY Homeodomain-like 201 254 IPR009057 -
Gabi953g00004 621 ProSiteProfiles Myb-like domain profile. 198 252 IPR001005 -
Gabi953g00004 621 Pfam Myb-like DNA-binding domain 203 248 IPR001005 -
Gabi953g00004 621 MobiDBLite consensus disorder prediction 570 598 - -
Gabi953g00004 621 CDD SANT_TRF 204 253 - -
Gabi953g00004 621 MobiDBLite consensus disorder prediction 180 208 - -
Gabi953g00004 621 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 615 - -
Gabi953g00004 621 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 256 IPR017930 -
Gabi953g00004 621 SMART sant 202 254 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi953g00004 Gabi-Chr953 52694 59133 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi953g00004 Myb_DNA-binding 5.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi953g00004 - - gmx:100805773 651.744