Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi952g00002 ATGGCTGGTGGAAATGCTGAGCTTTCTGATAATAAGCATTCAGATAATGTTGTGTTTTTGAATCCAGAATCATCCAGCAATTTTCAGGCTTCAACATCTGTGAATACAATTACTCAATTGTTGTCTACGAGCACCCAAACATGCAGCCACACTCATACATGCAACCCACCTGGCCCTGATGCTGCTCATACACACACATGCTATCACACACACACCCAAGTTTTTACATCTGAAGATGATGAAAGAGAGCATAGCAACTCAAGACCAAAAAGGGGTTCTGGCAATAGAGAAGCGGTTCGAAAGTATAGGGAGAAGAAGAAGGCACACACTGCTTACTTAGAGGAAGAAGTTAAGAAATTGCGTATGGTGAATCAGCAACTAGTTAGGAAACTAAAAGGGCAGGCACTTCTTGAAGCAGAATTGTTAAGGTTGAGGAGCATTTTGGCACACCTTAAGGGGAAAATAGACAATGAACTGGGTGATTTCCCCTTTCAAAAGCAGTGTAACTCTTCTACTATTTTCAAAGTAGGGGATAATGGTCTTCTGTGTCAAAACAATGTTCCATGCTTGCATCCACATGCAGGACCATCATCCAAGGTTAATAATATGTGTGCATATGGAAAATCCATTATTCCATTGGAAGGAAACTATCAACATGAAATTGTAGATTGTCAAGTAGATGCAAATAACATGCCCAGTACTGAAGCACAAACCGTAGACACAATGGATAACTTCATGTCTTCTGCATCTCAAGATGGGTAA 762 0.4055 MAGGNAELSDNKHSDNVVFLNPESSSNFQASTSVNTITQLLSTSTQTCSHTHTCNPPGPDAAHTHTCYHTHTQVFTSEDDEREHSNSRPKRGSGNREAVRKYREKKKAHTAYLEEEVKKLRMVNQQLVRKLKGQALLEAELLRLRSILAHLKGKIDNELGDFPFQKQCNSSTIFKVGDNGLLCQNNVPCLHPHAGPSSKVNNMCAYGKSIIPLEGNYQHEIVDCQVDANNMPSTEAQTVDTMDNFMSSASQDG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi952g00002 253 SMART brlzneu 77 150 IPR004827 GO:0003700|GO:0006355
Gabi952g00002 253 MobiDBLite consensus disorder prediction 75 99 - -
Gabi952g00002 253 Gene3D - 73 152 - -
Gabi952g00002 253 SUPERFAMILY Leucine zipper domain 90 132 IPR046347 GO:0003700|GO:0006355
Gabi952g00002 253 PANTHER CCAAT/ENHANCER BINDING PROTEIN 17 163 IPR031106 GO:0003700|GO:0006351
Gabi952g00002 253 Pfam Basic region leucine zipper 86 139 IPR004827 GO:0003700|GO:0006355
Gabi952g00002 253 CDD bZIP 95 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi952g00002 Gabi-Chr952 34602 36297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi952g00002 45 189 bZIP Transcription Factor Family AT3G51960 55.405 3.83e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi952g00002 bZIP_2 1.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi952g00002 K25785 - gmx:100527780 357.066