Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi946g00007 ATGGAGCAGTTAGAAATAACACCGAAGAAATCATCGTCATCGTCATCAGTGAGATCATCATTTCACAGAGATCCTCGTGGCTCCCTCGAAGTGTTCAACCCAACAACCAACTCGACGGTGCGCTCTCAGCTCCTCCGGAAAACCTGGACAGAACCGCCGCAAGAACCACGCAACCCATTACCCTCCGATGAAATCATCACCACCTCCTGGATGGCCAACCCACCACCTCCGCCAGCCGGGGAATGCGGCGAGGCGGCGCAGAGAGCCGCCGAGTGGGGTTTGGTACTGAAAACGGACACGGAGACCGGGAAGCCGCGAGGGGTGGCTGTTCGGAACTCCGGCGGGGAGGAACCCAATGACAAAATAGTCGGTTCCTCTTCCAGAAAGAACTCCAACAACTCTGACAGAATCTCCGGCGACTCTTTTGACGGCGGCGCCAGCAAAGAATTCGGCGGGATTCCGAGAATTTCGAAAGACTTGAAGGACGCTCTGTCGGCGTTCCAACAGACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCCAGTGCCGGATTCTTTAAGATGACGGGTTATACATCCAAGGAAGTCATAGGAAGAAACTGTCGGCTTTTACAGGGTTTGGATACAGATCCGGAGGAAGTGGGAAAGATTAGGGAAGCGTTGCAAGCAGGGTCCAGTTACTGTGGAAGGATAATAAATTACAAGAAGGATGGGACACCCTTCTGGAACCTTCTCACTATTTCACCAATCAAGGACGACGATGGCAAAGTGCTCAAATTTATCGGAATGCAAGTGGAGGTTAGCAAGCATACGGAGGGGTCCAAGGAGAAGATGCTACGTCCCAATGGATTGCCCGAATCATTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCTACAACTTCAGTATCTGAGTTGGTGAAGGCAATGAAGCGCCCCCGAGCATTCAGTGAATCAACGAACCGTCCCTTGATCATAAAATCAGGAGGTGCTGAAGAAGAAGAAGAAGAGGAAGAGAAAACAGAAAATATATTAAGGAGAAAATGTGAGAGTGTGGCTTCATTTAGACGGAGATCACTAGGAGGAAATAGAAATTCAATGGAAGGAATCAGTGAGCTTCCTGAAAATAAACAGAAAAACTCTCATCGCCGTTCTTTCATGGGATTCATCACAAAAAATCAGTCCAACGATGAAAGCATCAATGATAATGTTATTGAGGATGTTAGCTCTGAGAATGAAGTTGATGAGAGGCCTGATAGTTTTGAATTTGATGATAAAGAAAAGCAAAGGGAAAAGCGAAAAGGTCTTGATCTTGCTACCACACTTGAACGTATAGAGAAAAACTTTGTCGTTACTGATCCAAGGCTTCCTGACAATCCTATAATCTTTGCATCTGATAGCTTTTTAGAGCTTTCAGAATATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCAGAAACTGTGAGGAAAATAAGAGAGGCAATTGACAACCAAACAGAAGTTACCGTGCAACTCATTAATTATACAAAGAGTGGCAAAAAGTTCTGGAACCTGTTTCATTTGCAACCCATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGCAGTCAACATATAGAGCCTCTTAACAACTGCATCGCAGAAGATAGTGCGAAGGAGGGAGAACAATTGGTCAAACAAACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCTAATCTAAAACCAGACGATTTATGGATGAATCATTCAAAAGTGGTTCATCCCAAACCTCATAGGAAGGGTAACGCTGCTTGGAGAGCTATTCAGAAGATCCTAGACACTGGAGAACAGATAGGCTTAAAGCACTTTAGGCCAATTAAACCTTTGGGGTCAGGAGATACTGGCAGCGTACATCTGGTGGAGCTGTGTGGAAGTGGTCAATATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAGTCCTTGACAAATTGGACCACCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACCAAAACACATGTTTGTTTGATAACTGATTACTATCCTGGTGGAGAACTATTCCTGCTTCTTGACCGGCAGCCAACAAAGGTTCTCAAGGAAGACGCGGCGAGATTTTATGCTGCTGAGGTAGTGATTGCATTGGAGTACCTTCATTGTCAAGGGATAATATACCGGGATTTGAAGCCAGAAAATGTGTTGATCCAGAGCTGTGGGCATGTGTCTCTGGCAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCACAGCTTATAATTCCAGCTACAAATGAAAAGAAAAAAAAGAAGAAGAAGAAACAACAGAAAAGTCAACAGTTTCCATTGTTTATAGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTATATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCACTGGGTATTCTTCTATACGAAATGCTTTATGGGTATACGCCGTTCAGGGGAAAGACAAGACAAAAAACATTTGCAAATATTCTTCACAAGGACATTAAGTTTCCCAAAAGAAAACCGGTAACTCTCCATGCAAAGCAGCTAATTCACTGGTTGTTGCACAGAGATCCCAAAAACAGATTGGGTTCACAGGAAGGAGCAAATGAAATTAAGCGGCACCCATTTTTTCGTAGTGTCAATTGGGCACTAATTCGTTGCATGAAACCTCCTGAGCTTGATGCTCCTCCCTTACTGGCAACTGAAGAAGGAAAAGAAGCCAAAGATGTAGACCCCGAGCAAGAGGATTTACAAACAAATGTTTTCTAA 2934 0.4427 MEQLEITPKKSSSSSSVRSSFHRDPRGSLEVFNPTTNSTVRSQLLRKTWTEPPQEPRNPLPSDEIITTSWMANPPPPPAGECGEAAQRAAEWGLVLKTDTETGKPRGVAVRNSGGEEPNDKIVGSSSRKNSNNSDRISGDSFDGGASKEFGGIPRISKDLKDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRLLQGLDTDPEEVGKIREALQAGSSYCGRIINYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGSKEKMLRPNGLPESLIRYDARQKEKATTSVSELVKAMKRPRAFSESTNRPLIIKSGGAEEEEEEEEKTENILRRKCESVASFRRRSLGGNRNSMEGISELPENKQKNSHRRSFMGFITKNQSNDESINDNVIEDVSSENEVDERPDSFEFDDKEKQREKRKGLDLATTLERIEKNFVVTDPRLPDNPIIFASDSFLELSEYSREEILGRNCRFLQGPETDPETVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHIEPLNNCIAEDSAKEGEQLVKQTAENVDEAVRELPDANLKPDDLWMNHSKVVHPKPHRKGNAAWRAIQKILDTGEQIGLKHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACTEREVLDKLDHPFLPALYASFQTKTHVCLITDYYPGGELFLLLDRQPTKVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLIQSCGHVSLADFDLSCLTSCKPQLIIPATNEKKKKKKKKQQKSQQFPLFIAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDIKFPKRKPVTLHAKQLIHWLLHRDPKNRLGSQEGANEIKRHPFFRSVNWALIRCMKPPELDAPPLLATEEGKEAKDVDPEQEDLQTNVF 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi946g00007 977 MobiDBLite consensus disorder prediction 1 148 - -
Gabi946g00007 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Gabi946g00007 977 ProSiteProfiles PAC domain profile. 230 284 IPR000700 -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 362 387 - -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 30 49 - -
Gabi946g00007 977 FunFam LOV domain-containing protein 639 723 - -
Gabi946g00007 977 PANTHER FLIPPASE KINASE 1-RELATED 304 952 - -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 124 140 - -
Gabi946g00007 977 SMART pas_2 441 510 IPR000014 -
Gabi946g00007 977 SMART pas_2 158 227 IPR000014 -
Gabi946g00007 977 Coils Coil 571 591 - -
Gabi946g00007 977 CDD PAS 183 272 IPR000014 -
Gabi946g00007 977 ProSiteProfiles PAS repeat profile. 439 512 IPR000014 -
Gabi946g00007 977 CDD PAS 454 554 IPR000014 -
Gabi946g00007 977 ProSiteProfiles PAC domain profile. 513 567 IPR000700 -
Gabi946g00007 977 CDD STKc_phototropin_like 638 952 - -
Gabi946g00007 977 SMART pac_2 233 275 IPR001610 -
Gabi946g00007 977 SMART pac_2 516 558 IPR001610 -
Gabi946g00007 977 ProSiteProfiles Protein kinase domain profile. 640 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi946g00007 977 MobiDBLite consensus disorder prediction 415 439 - -
Gabi946g00007 977 FunFam Putative LOV domain-containing protein 724 944 - -
Gabi946g00007 977 Gene3D PAS domain 170 327 - -
Gabi946g00007 977 Gene3D PAS domain 427 592 - -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 412 439 - -
Gabi946g00007 977 Pfam Protein kinase domain 642 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi946g00007 977 Gene3D Transferase(Phosphotransferase) domain 1 724 941 - -
Gabi946g00007 977 ProSiteProfiles PAS repeat profile. 156 227 IPR000014 -
Gabi946g00007 977 SUPERFAMILY PYP-like sensor domain (PAS domain) 455 554 IPR035965 -
Gabi946g00007 977 FunFam LOV domain-containing protein 428 592 - -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 954 970 - -
Gabi946g00007 977 Gene3D Phosphorylase Kinase; domain 1 639 723 - -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 363 379 - -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 1 22 - -
Gabi946g00007 977 SUPERFAMILY Protein kinase-like (PK-like) 627 953 IPR011009 -
Gabi946g00007 977 NCBIfam PAS domain S-box protein 183 276 IPR000014 -
Gabi946g00007 977 NCBIfam PAS domain S-box protein 463 554 IPR000014 -
Gabi946g00007 977 SUPERFAMILY PYP-like sensor domain (PAS domain) 177 269 IPR035965 -
Gabi946g00007 977 FunFam Putative LOV domain-containing protein 170 326 - -
Gabi946g00007 977 ProSitePatterns Protein kinases ATP-binding region signature. 646 669 IPR017441 GO:0005524
Gabi946g00007 977 Pfam PAS domain 177 273 IPR000014 -
Gabi946g00007 977 Pfam PAS domain 462 554 IPR000014 -
Gabi946g00007 977 MobiDBLite consensus disorder prediction 951 977 - -
Gabi946g00007 977 SMART serkin_6 640 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi946g00007 Gabi-Chr946 144783 164112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi946g00007 4 977 AGC Kinase Gene Family AT3G45780 69.132 0.0 1333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi946g00007 Pkinase 7.9e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi946g00007 K20715 - gmx:100817565 1560.04